(Q28545866)

English

Geographic and temporal trends in the molecular epidemiology and genetic mechanisms of transmitted HIV-1 drug resistance: an individual-patient- and sequence-level meta-analysis

scientific article

In more languages

Statements

scholarly article

0 references

1 reference

based on heuristic

inferred from title

Geographic and temporal trends in the molecular epidemiology and genetic mechanisms of transmitted HIV-1 drug resistance: an individual-patient- and sequence-level meta-analysis (English)

0 references

HIV transmission

0 references

1 reference

based on heuristic

inferred from title

1 reference

based on heuristic

inferred from title

63

0 references

Marie-Laure Chaix

20

0 references

Anne-Mieke Vandamme

72

0 references

5

0 references

71

object named as

John P A Ioannidis

0 references

Manon Ragonnet-Cronin

object named as

Manon L Ragonnet-Cronin

51

0 references

object named as

Gonzalo Yebra

70

0 references

Maja Stanojevic

object named as

Maja Stanojevic

59

0 references

Pascal O Bessong

object named as

Pascal O Bessong

14

0 references

Zabrina L Brumme

object named as

Zabrina L Brumme

17

0 references

12

object named as

Radko Avi

0 references

43

object named as

Irja Lutsar

0 references

25

object named as

Diane Descamps

0 references

Vicente Soriano

object named as

Vincent V Soriano

57

0 references

Martine Peeters

48

object named as

Martine Peeters

0 references

Michael P. Busch

18

object named as

Michael P Busch

0 references

44

object named as

Lynn Morris

0 references

Pontiano Kaleebu

37

object named as

Pontiano Kaleebu

0 references

Sasisopin Kiertiburanakul

39

object named as

Sasisopin Kiertiburanakul

0 references

Somnuek Sungkanuparph

62

object named as

Somnuek Sungkanuparph

0 references

28

object named as

Susan H Eshleman

0 references

40

object named as

Jerome H Kim

0 references

11

object named as

Jan Albert

0 references

Tobias F Rinke de Wit

9

object named as

Tobias F Rinke de Wit

0 references

49

object named as

Mario Poljak

0 references

45

object named as

Nicaise Ndembi

0 references

7

object named as

Raph L Hamers

0 references

Cillian De Gascun

23

object named as

Cillian F De Gascun

0 references

1

object named as

Soo-Yon Rhee

0 references

6

object named as

Vici Varghese

0 references

Silvia Bertagnolio

8

object named as

Silvia Bertagnolio

0 references

Santiago Ávila-Ríos

13

object named as

Santiago Avila-Rios

0 references

Hermann Bussmann

19

object named as

Hermann Bussmann

0 references

21

object named as

Bum Sik Chin

0 references

22

object named as

Toni T D'Aquin

0 references

24

object named as

Anne Derache

0 references

Alaka Deshpande

26

object named as

Alaka K Deshpande

0 references

Cyrille F Djoko

27

object named as

Cyrille F Djoko

0 references

30

object named as

Pierre Frange

0 references

Seiichiro Fujisaki

31

object named as

Seiichiro Fujisaki

0 references

Richard Harrigan

32

object named as

P Richard Harrigan

0 references

33

object named as

Junko Hattori

0 references

34

object named as

Africa Holguin

0 references

35

object named as

Gillian M Hunt

0 references

Hiroshi Ichimura

36

object named as

Hiroshi Ichimura

0 references

David Katzenstein

38

object named as

David Katzenstein

0 references

41

object named as

Sung Soon Kim

0 references

50

object named as

Matt A Price

0 references

Morgane Rolland

53

object named as

Morgane Rolland

0 references

Sunee Sirivichayakul

54

object named as

Sunee Sirivichayakul

0 references

55

object named as

Davey M Smith

0 references

Deogratius Ssemwanga

58

object named as

Deogratius Ssemwanga

0 references

61

object named as

Wataru Sugiura

0 references

64

object named as

Kok Keng Tee

0 references

68

object named as

Chunfu Yang

0 references

69

object named as

Rongge Yang

0 references

Robert W Shafer

73

object named as

Robert W Shafer

0 references

Avelin F. Aghokeng

10

object named as

Avelin F Aghokeng

0 references

Jose Luis Blanco

2

object named as

Jose Luis Blanco

0 references

Ramesh Paranjape

47

object named as

Ramesh S Paranjape

0 references

author name string

Michael R Jordan

3

0 references

Jonathan Taylor

4

0 references

James I Brooks

15

0 references

Charles A B Boucher

16

0 references

Herve Fleury

29

0 references

Yanpeng Li

42

0 references

Kee Peng Ng

46

0 references

Gustavo Reyes-Terán

52

0 references

Marcelo A Soares

56

0 references

Mariane A Stefani

60

0 references

Hong-Ha M Truong

65

0 references

David A M C van de Vijver

66

0 references

Nicole Vidal

67

0 references

language of work or name

0 references

publication date

April 2015

0 references

0 references

12

0 references

4

0 references

e1001810

0 references

copyright license

Creative Commons CC0 License

7 April 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

Simultaneous detection of major drug resistance mutations in the protease and reverse transcriptase genes for HIV-1 subtype C by use of a multiplex allele-specific assay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

19 March 2017

Viral suppression after 12 months of antiretroviral therapy in low- and middle-income countries: a systematic review

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

19 March 2017

Relationship between minority nonnucleoside reverse transcriptase inhibitor resistance mutations, adherence, and the risk of virologic failure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

19 March 2017

Drug resistance mutations for surveillance of transmitted HIV-1 drug-resistance: 2009 update

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

19 March 2017

BEAST: Bayesian evolutionary analysis by sampling trees

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

19 March 2017

Increased ability for selection of zidovudine resistance in a distinct class of wild-type HIV-1 from drug-naive persons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

19 March 2017

APE: Analyses of Phylogenetics and Evolution in R language

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

7 April 2017

Human immunodeficiency virus reverse transcriptase and protease sequence database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

7 April 2017

Effectiveness and cost-effectiveness of potential responses to future high levels of transmitted HIV drug resistance in antiretroviral drug-naive populations beginning treatment: modelling study and economic analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Oligonucleotide ligation assay detects HIV drug resistance associated with virologic failure among antiretroviral-naive adults in Kenya.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Prevalence and virologic consequences of transmitted HIV-1 drug resistance in Uganda

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

E138A in HIV-1 reverse transcriptase is more common in subtype C than B: implications for rilpivirine use in resource-limited settings

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Predicted levels of HIV drug resistance: potential impact of expanding diagnosis, retention, and eligibility criteria for antiretroviral therapy initiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Extraordinary heterogeneity of virological outcomes in patients receiving highly antiretroviral therapy and monitored with the World Health Organization public health approach in sub-saharan Africa and southeast Asia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Short communication: molecular epidemiology of HIV type 1 infection in northern Greece (2009-2010): evidence of a transmission cluster of HIV type 1 subtype A1 drug-resistant strains among men who have sex with men.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Persistence of HIV-1 transmitted drug resistance mutations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Prevention of mother-to-child HIV transmission within the continuum of maternal, newborn, and child health services

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Simultaneous and sensitive detection of human immunodeficiency virus type 1 (HIV) drug resistant genotypes by multiplex oligonucleotide ligation assay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Evaluation of sequence ambiguities of the HIV-1 pol gene as a method to identify recent HIV-1 infection in transmitted drug resistance surveys

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

High coverage of ART associated with decline in risk of HIV acquisition in rural KwaZulu-Natal, South Africa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Increases in adult life expectancy in rural South Africa: valuing the scale-up of HIV treatment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

HIV-1 amino acid changes among participants with virologic failure: associations with first-line efavirenz or atazanavir plus ritonavir and disease status

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Rates of emergence of HIV drug resistance in resource-limited settings: a systematic review

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Global trends in antiretroviral resistance in treatment-naive individuals with HIV after rollout of antiretroviral treatment in resource-limited settings: a global collaborative study and meta-regression analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

HIV treatment as prevention: systematic comparison of mathematical models of the potential impact of antiretroviral therapy on HIV incidence in South Africa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Temporal changes in the epidemiology of transmission of drug-resistant HIV-1 across the world.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

The HIVdb system for HIV-1 genotypic resistance interpretation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Effect of pretreatment HIV-1 drug resistance on immunological, virological, and drug-resistance outcomes of first-line antiretroviral treatment in sub-Saharan Africa: a multicentre cohort study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Differential persistence of transmitted HIV-1 drug resistance mutation classes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Ambiguous nucleotide calls from population-based sequencing of HIV-1 are a marker for viral diversity and the age of infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Use of generic antiretroviral agents and cost savings in PEPFAR treatment programs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Virological follow-up of adult patients in antiretroviral treatment programmes in sub-Saharan Africa: a systematic review

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

The calibrated population resistance tool: standardized genotypic estimation of transmitted HIV-1 drug resistance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

A comparison of summary patient-level covariates in meta-regression with individual patient data meta-analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Switch to unusual amino acids at codon 215 of the human immunodeficiency virus type 1 reverse transcriptase gene in seroconvertors infected with zidovudine-resistant variants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

29 September 2017

Automated subtyping of HIV-1 genetic sequences for clinical and surveillance purposes: performance evaluation of the new REGA version 3 and seven other tools

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4388826

3 June 2018

Preexisting resistance to nonnucleoside reverse-transcriptase inhibitors predicts virologic failure of an efavirenz-based regimen in treatment-naive HIV-1-infected subjects

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PMED.1001810

21 January 2018

Effect of transmitted drug resistance on virological and immunological response to initial combination antiretroviral therapy for HIV (EuroCoord-CHAIN joint project): a European multicohort study

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PMED.1001810

21 January 2018

Genetic diversity as a marker for timing infection in HIV-infected patients: evaluation of a 6-month window and comparison with BED.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PMED.1001810

21 January 2018

Demonstration of sustained drug-resistant human immunodeficiency virus type 1 lineages circulating among treatment-naïve individuals

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PMED.1001810

21 January 2018

ARVs: the next generation. Going boldly together to new frontiers of HIV treatment

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PMED.1001810

21 January 2018

HIV-1 transmission cluster with M41L 'singleton' mutation and decreased transmission of resistance in newly diagnosed Swedish homosexual men

1 reference

https://pubmed.ncbi.nlm.nih.gov/25849352

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Baseline genotype as a predictor of virological failure to emtricitabine or stavudine in combination with didanosine and efavirenz

1 reference

https://pubmed.ncbi.nlm.nih.gov/25849352

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Recommendations for surveillance of transmitted HIV drug resistance in countries scaling up antiretroviral treatment

1 reference

https://pubmed.ncbi.nlm.nih.gov/25849352

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q28545866&oldid=1857709056"