(Q28584597)

9

object named as

Laurence Delhaes

0 references

Eric Viscogliosi

7

object named as

Eric Viscogliosi

0 references

author name string

Linh Do Ngoc Nguyen

1

0 references

Pieter Deschaght

2

0 references

Sophie Merlin

3

0 references

Alexandre Loywick

4

0 references

Christophe Audebert

5

0 references

Sabine Van Daele

Creative Commons Attribution 4.0 International

6

0 references

language of work or name

English

0 references

publication date

2016

0 references

published in

PLOS One

0 references

volume

11

0 references

issue

12

0 references

page(s)

e0168860

0 references

copyright license

start time

28 December 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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1 reference

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The airway microbiota in cystic fibrosis: a complex fungal and bacterial community--implications for therapeutic management

17 March 2017

1 reference

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Pseudomonas aeruginosa biofilms in cystic fibrosis

17 March 2017

1 reference

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Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

17 March 2017

1 reference

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Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome

17 March 2017

1 reference

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Spatial Variation in the Healthy Human Lung Microbiome and the Adapted Island Model of Lung Biogeography

17 March 2017

1 reference

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The lung mycobiome: an emerging field of the human respiratory microbiome.

29 September 2017

1 reference

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Quantification of Pseudomonas aeruginosa in multispecies biofilms using PMA-qPCR.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Environment and colonisation sequence are key parameters driving cooperation and competition between Pseudomonas aeruginosa cystic fibrosis strains and oral commensal streptococci

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Application of a neutral community model to assess structuring of the human lung microbiome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

A Winogradsky-based culture system shows an association between microbial fermentation and cystic fibrosis exacerbation

29 September 2017

1 reference

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Characterization and quantification of the fungal microbiome in serial samples from individuals with cystic fibrosis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

The effect of propidium monoazide treatment on the measured bacterial composition of clinical samples after the use of a mouthwash

29 September 2017

1 reference

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Diversity of rare and abundant bacteria in surface waters of the Southern Adriatic Sea.

29 September 2017

1 reference

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Patterns of rare and abundant marine microbial eukaryotes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

International Space Station environmental microbiome - microbial inventories of ISS filter debris

29 September 2017

1 reference

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Differential resistance of drinking water bacterial populations to monochloramine disinfection

29 September 2017

1 reference

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Development and antimicrobial susceptibility studies of in vitro monomicrobial and polymicrobial biofilm models with Aspergillus fumigatus and Pseudomonas aeruginosa

29 September 2017

1 reference

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Breath gas metabolites and bacterial metagenomes from cystic fibrosis airways indicate active pH neutral 2,3-butanedione fermentation

29 September 2017

1 reference

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Is the improvement of CF patients, hospitalized for pulmonary exacerbation, correlated to a decrease in bacterial load?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Streptococcal co-infection augments Candida pathogenicity by amplifying the mucosal inflammatory response.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Candida albicans and Pseudomonas aeruginosa interactions: more than an opportunistic criminal association?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Differences in fungi present in induced sputum samples from asthma patients and non-atopic controls: a community based case control study.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Short-term dynamics of diversity patterns: evidence of continual reassembly within lacustrine small eukaryotes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Reducing bias in bacterial community analysis of lower respiratory infections

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

New perspectives on viable microbial communities in low-biomass cleanroom environments

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Progress in understanding preferential detection of live cells using viability dyes in combination with DNA amplification

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Direct sampling of cystic fibrosis lungs indicates that DNA-based analyses of upper-airway specimens can misrepresent lung microbiota

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

High-coverage ITS primers for the DNA-based identification of ascomycetes and basidiomycetes in environmental samples.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Lung-enriched organisms and aberrant bacterial and fungal respiratory microbiota after lung transplant.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Prevalence of streptococci and increased polymicrobial diversity associated with cystic fibrosis patient stability

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Update in cystic fibrosis 2011.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Decade-long bacterial community dynamics in cystic fibrosis airways

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Pulmonary exacerbations in cystic fibrosis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

ESPRIT-Tree: hierarchical clustering analysis of millions of 16S rRNA pyrosequences in quasilinear computational time

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Comparison of culture and qPCR for the detection of Pseudomonas aeruginosa in not chronically infected cystic fibrosis patients

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Medically important bacterial-fungal interactions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Ecology of the rare microbial biosphere of the Arctic Ocean

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Phylogenetic circumscription of Saccharomyces, Kluyveromyces and other members of the Saccharomycetaceae, and the proposal of the new genera Lachancea, Nakaseomyces, Naumovia, Vanderwaltozyma and Zygotorulaspora

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Factors associated with response to treatment of pulmonary exacerbations in cystic fibrosis patients.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

The cystic fibrosis lung microbiome

3 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0168860

Assessing the diagnostic importance of nonviable bacterial cells in respiratory infections

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0168860

Quantifying fungal viability in air and water samples using quantitative PCR after treatment with propidium monoazide (PMA).

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0168860

Viable quantitative PCR for assessing the response of Candida albicans to antifungal treatment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0168860

Diagnosis of invasive aspergillosis using bronchoalveolar lavage in haematology patients: influence of bronchoalveolar lavage human DNA content on real-time PCR performance.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0168860

Novel immunologic classification of aspergillosis in adult cystic fibrosis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0168860

Host-microorganism interactions in lung diseases

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0168860

Discrimination between live and dead cellsin bacterial communities from environmental water samples analyzed by 454 pyrosequencing

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5193350

Candida albicans impairs macrophage function and facilitates Pseudomonas aeruginosa pneumonia in rat

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28030619