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Biodiversity and distribution of polar freshwater DNA viruses
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scholarly article
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title
Biodiversity and distribution of polar freshwater DNA viruses
(English)
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main subject
biodiversity
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fresh water
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freshwater biodiversity
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inferred from title
author
Daniel Aguirre de Cárcer
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1
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Europe PubMed Central
PMC publication ID
4640604
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26601189%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 June 2020
Alberto López-Bueno
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2
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Europe PubMed Central
PMC publication ID
4640604
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26601189%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 June 2020
Antonio Alcamí
series ordinal
4
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Europe PubMed Central
PMC publication ID
4640604
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26601189%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 June 2020
author name string
David A Pearce
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3
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Europe PubMed Central
PMC publication ID
4640604
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26601189%20AND%20SRC:MED&resulttype=core&format=json
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7 June 2020
language of work or name
English
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publication date
June 2015
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Science Advances
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Europe PubMed Central
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4640604
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26601189%20AND%20SRC:MED&resulttype=core&format=json
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7 June 2020
volume
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
4640604
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26601189%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 June 2020
issue
5
1 reference
stated in
Europe PubMed Central
PMC publication ID
4640604
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26601189%20AND%20SRC:MED&resulttype=core&format=json
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7 June 2020
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e1400127
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Europe PubMed Central
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4640604
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7 June 2020
cites work
Evolution and diversity of the Microviridae viral family through a collection of 81 new complete genomes assembled from virome reads
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
17 March 2017
A novel virus genome discovered in an extreme environment suggests recombination between unrelated groups of RNA and DNA viruses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
17 March 2017
Fast gapped-read alignment with Bowtie 2
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
17 March 2017
The Sorcerer II Global Ocean Sampling Expedition: metagenomic characterization of viruses within aquatic microbial samples
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
17 March 2017
MEGAN analysis of metagenomic data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
17 March 2017
The marine viromes of four oceanic regions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
17 March 2017
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
17 March 2017
Viruses in the sea
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
17 March 2017
Giant viruses in the oceans: the 4th Algal Virus Workshop
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
17 March 2017
PHACCS, an online tool for estimating the structure and diversity of uncultured viral communities using metagenomic information
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
17 March 2017
MUSCLE: multiple sequence alignment with high accuracy and high throughput
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
17 March 2017
Versatile and open software for comparing large genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
17 March 2017
Genomic analysis of uncultured marine viral communities
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
17 March 2017
A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
17 March 2017
phangorn: phylogenetic analysis in R
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
7 April 2017
Quality control and preprocessing of metagenomic datasets
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
7 April 2017
Marine viruses--major players in the global ecosystem
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
7 April 2017
Functional metagenomic profiling of nine biomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
9 May 2017
Estimation of viral richness from shotgun metagenomes using a frequency count approach
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Metabolic reprogramming by viruses in the sunlit and dark ocean
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
The global virome: not as big as we thought?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Acinetobacter phage genome is similar to Sphinx 2.36, the circular DNA copurified with TSE infected particles
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Previously unknown and highly divergent ssDNA viruses populate the oceans
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Sequencing platform and library preparation choices impact viral metagenomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
The Pacific Ocean virome (POV): a marine viral metagenomic dataset and associated protein clusters for quantitative viral ecology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Are we missing half of the viruses in the ocean?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Reference-independent comparative metagenomics using cross-assembly: crAss.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Pole-to-pole biogeography of surface and deep marine bacterial communities
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Viruses in the desert: a metagenomic survey of viral communities in four perennial ponds of the Mauritanian Sahara
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Evaluation of methods to concentrate and purify ocean virus communities through comparative, replicated metagenomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Assessing the diversity and specificity of two freshwater viral communities through metagenomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Amplification methods bias metagenomic libraries of uncultured single-stranded and double-stranded DNA viruses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Next generation sequence assembly with AMOS.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Are low temperature habitats hot spots of microbial evolution driven by viruses?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Soil bacterial diversity in the Arctic is not fundamentally different from that found in other biomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Metagenomic detection of phage-encoded platelet-binding factors in the human oral cavity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Viral and microbial community dynamics in four aquatic environments.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
CD-HIT Suite: a web server for clustering and comparing biological sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
High diversity of the viral community from an Antarctic lake
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Metagenomic analysis of viruses in reclaimed water
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Microbiology. No place too cold
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Laboratory procedures to generate viral metagenomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Bacteriophage in polar inland waters
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Ecology. Antarctic biodiversity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Global patterns in bacterial diversity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Photosynthesis genes in marine viruses yield proteins during host infection
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Marine ecosystems: bacterial photosynthesis genes in a virus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Proteorhodopsin phototrophy in the ocean.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Marine viruses and their biogeochemical and ecological effects
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
29 September 2017
Metavir: a web server dedicated to virome analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
27 November 2018
Nuclease resistant circular DNAs copurify with infectivity in scrapie and CJD.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
27 November 2018
Multiple displacement amplification compromises quantitative analysis of metagenomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
27 November 2018
Viral-mediated lysis of microbes and carbon release in the sub-Antarctic and Polar Frontal zones of the Australian Southern Ocean
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
27 November 2018
Power law rankâ abundance models for marine phage communities
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
27 November 2018
Ecology's oldest pattern?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4640604
retrieved
27 November 2018
Identifiers
DOI
10.1126/SCIADV.1400127
2 references
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
653687
stated in
Europe PubMed Central
PMC publication ID
4640604
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26601189%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 June 2020
OpenCitations bibliographic resource ID
653687
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
653687
PMC publication ID
4640604
2 references
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
653687
stated in
Europe PubMed Central
PMC publication ID
4640604
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26601189%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 June 2020
PubMed publication ID
26601189
2 references
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
653687
stated in
Europe PubMed Central
PMC publication ID
4640604
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26601189%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 June 2020
ResearchGate publication ID
281529113
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