(Q34965860)

5 August 2017

Laboratory procedures to generate viral metagenomes (English)

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5 August 2017

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Mya Breitbart

3

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Forest Rohwer

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5

object named as

Forest Rohwer

1 reference

5 August 2017

Rebecca V Thurber

1

1 reference

5 August 2017

Matthew Haynes

series ordinal

2

1 reference

5 August 2017

Linda Wegley

series ordinal

4

1 reference

5 August 2017

1 January 2009

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5 August 2017

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5 August 2017

4

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5 August 2017

4

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5 August 2017

470-483

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https://scigraph.springernature.com/pub.10.1038/nprot.2009.10

5 August 2017

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cites work

Phage genomics: small is beautiful

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

The marine viromes of four oceanic regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

The Phage Proteomic Tree: a genome-based taxonomy for phage

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Metagenomics for studying unculturable microorganisms: cutting the Gordian knot

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Metagenomics: DNA sequencing of environmental samples.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

PHACCS, an online tool for estimating the structure and diversity of uncultured viral communities using metagenomic information

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Power law rankâ abundance models for marine phage communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Diversity and population structure of a near-shore marine-sediment viral community.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Metagenomic analyses of an uncultured viral community from human feces

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Method for discovering novel DNA viruses in blood using viral particle selection and shotgun sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Genomic analysis of uncultured marine viral communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Phage community dynamics in hot springs

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Biodiversity and biogeography of phages in modern stromatolites and thrombolites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Viral communities associated with healthy and bleaching corals

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

RNA viral community in human feces: prevalence of plant pathogenic viruses

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Metagenomic characterization of Chesapeake Bay virioplankton

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

A comparison of methods for counting viruses in aquatic systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Accurate estimation of viral abundance by epifluorescence microscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

A bacterial metapopulation adapts locally to phage predation despite global dispersal

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Next-generation sequencing transforms today's biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Metagenomics: read length matters

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Metagenomic analysis of the microbial community associated with the coral Porites astreoides.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Advanced sequencing technologies and their wider impact in microbiology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Parallel tagged sequencing on the 454 platform

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

A virus discovery method incorporating DNase treatment and its application to the identification of two bovine parvovirus species

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Bioinformatics for whole-genome shotgun sequencing of microbial communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Finding novel genes in bacterial communities isolated from the environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Phylogenetic classification of short environmental DNA fragments

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

A statistical toolbox for metagenomics: assessing functional diversity in microbial communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Get the most out of your metagenome: computational analysis of environmental sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Strainer: software for analysis of population variation in community genomic datasets.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Use of simulated data sets to evaluate the fidelity of metagenomic processing methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

MetaGene: prokaryotic gene finding from environmental genome shotgun sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Minimus: a fast, lightweight genome assembler

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

CAMERA: a community resource for metagenomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Microbial genome data resources

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

An experimental metagenome data management and analysis system

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

IMG/M: a data management and analysis system for metagenomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Aquatic virus diversity accessed through omic techniques: a route map to function.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Abundance and diversity of viruses in six Delaware soils

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Metagenomic analysis indicates that stressors induce production of herpes-like viruses in the coral Porites compressa.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

SNDV, a novel virus of the extremely thermophilic and acidophilic archaeon Sulfolobus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Sampling Natural Viral Communities from Soil for Culture-Independent Analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Virus and prokaryote enumeration from planktonic aquatic environments by epifluorescence microscopy with SYBR Green I.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Virology: Gulliver among the Lilliputians

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

'Virophage' suggests viruses are alive.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Redefining viruses: lessons from Mimivirus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Giant viruses infecting algae

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Mimivirus and the emerging concept of "giant" virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Assembly of viral metagenomes from yellowstone hot springs

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Characterization of virus isolates by particle-associated nucleic acid PCR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

The complete genomes of three viruses assembled from shotgun libraries of marine RNA virus communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Metagenomic analysis of coastal RNA virus communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

New genera of RNA viruses in subtropical seawater, inferred from polymerase gene sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Assessment of whole genome amplification-induced bias through high-throughput, massively parallel whole genome sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Rapid amplification of plasmid and phage DNA using Phi 29 DNA polymerase and multiply-primed rolling circle amplification

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Unbiased whole-genome amplification directly from clinical samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Isothermal strand-displacement amplification applications for high-throughput genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Whole transcriptome amplification for gene expression profiling and development of molecular archives

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Echolocating bats use a nearly time-optimal strategy to intercept prey

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Production of shotgun libraries using random amplification

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

What's in the mix: phylogenetic classification of metagenome sequence samples

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Decreasing amplification bias associated with multiple displacement amplification and short tandem repeat genotyping

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.10

Population dynamics of chesapeake bay virioplankton: total-community analysis by pulsed-field gel electrophoresis

31 March 2020

1 reference

12 December 2020

Enumeration of marine viruses in culture and natural samples by flow cytometry

1 reference

12 December 2020

Mechanisms and rates of decay of marine viruses in seawater.

1 reference

12 December 2020

Ribonuclease Sensitivity of Semliki Forest Virus Nucleocapsids

1 reference

12 December 2020

Use of ultrafiltration to isolate viruses from seawater which are pathogens of marine phytoplankton.

1 reference

12 December 2020

Identifiers

DOI

10.1038/NPROT.2009.10

1 reference

Dimensions Publication ID

5 August 2017

0 references

1 reference