(Q28646691)

English

Strong natural pausing by RNA polymerase II within 10 bases of transcription start may result in repeated slippage and reextension of the nascent RNA.

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

Strong natural pausing by RNA polymerase II within 10 bases of transcription start may result in repeated slippage and reextension of the nascent RNA. (English)

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

author name string

Mahadeb Pal

1

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

Donal S Luse

2

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

language of work or name

0 references

publication date

1 January 2002

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

Molecular and Cellular Biology

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Europe PubMed Central

PubMed publication ID

6 July 2017

22

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

1

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

30-40

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

describes a project that uses

1 reference

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC134219/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

Promoter clearance by RNA polymerase II is an extended, multistep process strongly affected by sequence

1 reference

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Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution

1 reference

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17 March 2017

Promoter-associated pausing in promoter architecture and postinitiation transcriptional regulation

1 reference

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17 March 2017

Three transitions in the RNA polymerase II transcription complex during initiation

1 reference

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A role for TFIIH in controlling the activity of early RNA polymerase II elongation complexes

1 reference

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17 March 2017

Recycling of the general transcription factors during RNA polymerase II transcription

1 reference

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RNA polymerase clamps down

1 reference

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Mechanism of transcription initiation and promoter escape by RNA polymerase II.

1 reference

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A structural model of transcription elongation

1 reference

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Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.

1 reference

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1 reference

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Transcription elongation: structural basis and mechanisms

1 reference

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Shifting RNA polymerase into overdrive

1 reference

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3 June 2018

Interaction of a nascent RNA structure with RNA polymerase is required for hairpin-dependent transcriptional pausing but not for transcript release

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134219

3 June 2018

Structural changes in the RNA polymerase II transcription complex during transition from initiation to elongation

1 reference

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3 June 2018

Basic mechanisms of transcript elongation and its regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134219

3 June 2018

RNA polymerase slides home: pause and termination site recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134219

3 June 2018

Promoter proximal sequences modulate RNA polymerase II elongation by a novel mechanism.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134219

3 June 2018

Promoter escape by RNA polymerase II. A role for an ATP cofactor in suppression of arrest by polymerase at promoter-proximal sites

1 reference

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3 June 2018

Increased accommodation of nascent RNA in a product site on RNA polymerase II during arrest

1 reference

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Two modes of transcription initiation in vitro at the rrnB P1 promoter of Escherichia coli

1 reference

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Determination of sequences at the capped 5′ ends of polyoma virus early region transcripts synthesized in vivo and in vitro demonstrates an unusual microheterogeneity

1 reference

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3 June 2018

Mapping and characterization of transcriptional pause sites in the early genetic region of bacteriophage T7.

1 reference

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3 June 2018

Heterogeneous initiation due to slippage at the bacteriophage 82 late gene promoter in vitro.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134219

3 June 2018

RNA polymerase II elongation complexes paused after the synthesis of 15- or 35-base transcripts have different structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134219

3 June 2018

Purified RNA polymerase II recognizes specific termination sites during transcription in vitro.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134219

20 June 2018

A kinetic model for the early steps of RNA synthesis by human RNA polymerase II.

1 reference

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27 November 2018

The RNA-DNA hybrid maintains the register of transcription by preventing backtracking of RNA polymerase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134219

27 November 2018

Transcription processivity: protein-DNA interactions holding together the elongation complex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134219

27 November 2018

Topology of the product binding site in RNA polymerase revealed by transcript slippage at the phage lambda PL promoter.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134219

27 November 2018

Regulation of pyrBI operon expression in Escherichia coli by UTP-sensitive reiterative RNA synthesis during transcriptional initiation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134219

27 November 2018

Slippage synthesis at the galP2 promoter of Escherichia coli and its regulation by UTP concentration and cAMP.cAMP receptor protein.

1 reference

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Pseudo-templated transcription by Escherichia coli RNA polymerase at a mutant promoter

1 reference

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27 November 2018

The 8-nucleotide-long RNA:DNA hybrid is a primary stability determinant of the RNA polymerase II elongation complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/11739720

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Translocation and transcriptional arrest during transcript elongation by RNA polymerase II

1 reference

https://pubmed.ncbi.nlm.nih.gov/11739720

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Studies of in vitro transcription by calf thymus RNA polymerase II using a novel duplex DNA template

1 reference

https://pubmed.ncbi.nlm.nih.gov/11739720

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA polymerase II ternary complexes may become arrested after transcribing to within 10 bases of the end of linear templates

1 reference

https://pubmed.ncbi.nlm.nih.gov/11739720

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mechanism of intrinsic transcription termination and antitermination

1 reference

https://pubmed.ncbi.nlm.nih.gov/11739720

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/MCB.22.1.30-40.2002

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

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