(Q28657953)

English

Sequencing of chloroplast genomes from wheat, barley, rye and their relatives provides a detailed insight into the evolution of the Triticeae tribe

scientific article (publication date: 2014)

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scholarly article

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Sequencing of chloroplast genomes from wheat, barley, rye and their relatives provides a detailed insight into the evolution of the Triticeae tribe (English)

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inferred from title

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inferred from title

object named as

Triticeae

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inferred from title

6

object named as

Thomas Wicker

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object named as

Beat Keller

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object named as

Nils Stein

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object named as

Eduard D Akhunov

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author name string

Christopher P Middleton

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Natacha Senerchia

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Benjamin Kilian

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language of work or name

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publication date

2014

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9

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3

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e85761

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copyright license

Creative Commons Attribution 4.0 International

10 March 2014

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April 2022 Public Data File from Crossref

copyright status

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MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

1 reference

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Genome sequencing and analysis of the model grass Brachypodium distachyon

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17 March 2017

The Sorghum bicolor genome and the diversification of grasses

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17 March 2017

Acc homoeoloci and the evolution of wheat genomes

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3948623

17 March 2017

jModelTest: phylogenetic model averaging

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17 March 2017

BEAST: Bayesian evolutionary analysis by sampling trees

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17 March 2017

Phylogenetic analyses of Vitis (Vitaceae) based on complete chloroplast genome sequences: effects of taxon sampling and phylogenetic methods on resolving relationships among rosids

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17 March 2017

SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building

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7 April 2017

r8s: inferring absolute rates of molecular evolution and divergence times in the absence of a molecular clock

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7 April 2017

Estimating absolute rates of molecular evolution and divergence times: a penalized likelihood approach

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7 April 2017

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21 January 2018

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7 April 2017

Evolutionary dynamics of retrotransposons assessed by high-throughput sequencing in wild relatives of wheat

1 reference

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20 June 2018

Computational thinking in the era of big data biology

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20 June 2018

Genome size variation in diploid and tetraploid wild wheats

1 reference

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20 June 2018

Multigenic phylogeny and analysis of tree incongruences in Triticeae (Poaceae).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3948623

20 June 2018

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1 reference

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20 June 2018

Instability of plastid DNA in the nuclear genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3948623

20 June 2018

Analysis of intraspecies diversity in wheat and barley genomes identifies breakpoints of ancient haplotypes and provides insight into the structure of diploid and hexaploid triticeae gene pools

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3948623

20 June 2018

The complete chloroplast genome sequence of Brachypodium distachyon: sequence comparison and phylogenetic analysis of eight grass plastomes

1 reference

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20 June 2018

Molecular diversity at 18 loci in 321 wild and 92 domesticate lines reveal no reduction of nucleotide diversity during Triticum monococcum (Einkorn) domestication: implications for the origin of agriculture

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3948623

20 June 2018

Complete chloroplast genome sequences of Hordeum vulgare, Sorghum bicolor and Agrostis stolonifera, and comparative analyses with other grass genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3948623

20 June 2018

The Molecular Basis of Genetic Diversity among Cytoplasms of TRITICUM and AEGILOPS Species. II. on the Origin of Polyploid Wheat Cytoplasms as Suggested by Chloroplast DNA Restriction Fragment Patterns

1 reference

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20 June 2018

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20 June 2018

Phylogenetic relationships of Triticum and Aegilops and evidence for the origin of the A, B, and D genomes of common wheat (Triticum aestivum).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3948623

20 June 2018

Tempos of gene locus deletions and duplications and their relationship to recombination rate during diploid and polyploid evolution in the Aegilops-Triticum alliance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3948623

20 June 2018

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1 reference

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1 reference

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20 June 2018

Sequence polymorphism in polyploid wheat and their d-genome diploid ancestor

1 reference

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20 June 2018

The organization and rate of evolution of wheat genomes are correlated with recombination rates along chromosome arms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3948623

20 June 2018

Genes encoding plastid acetyl-CoA carboxylase and 3-phosphoglycerate kinase of the Triticum/Aegilops complex and the evolutionary history of polyploid wheat

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3948623

20 June 2018

Structural features of a wheat plastome as revealed by complete sequencing of chloroplast DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3948623

20 June 2018

Nuclear DNA amounts in angiosperms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3948623

20 June 2018

Genome size and genome evolution in diploid Triticeae species

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0085761

21 January 2018

Phylogenetic analysis of the acetyl-CoA carboxylase and 3-phosphoglycerate kinase loci in wheat and other grasses

1 reference

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21 January 2018

Independent Wheat B and G Genome Origins in Outcrossing Aegilops Progenitor Haplotypes

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0085761

21 January 2018

Plasmon analysis of Triticum (wheat) and Aegilops. 1. Production of alloplasmic common wheats and their fertilities.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0085761

21 January 2018

Comparison of orthologous loci from small grass genomes Brachypodium and rice: implications for wheat genomics and grass genome annotation.

1 reference

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21 January 2018

Large intraspecific haplotype variability at the Rph7 locus results from rapid and recent divergence in the barley genome.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0085761

21 January 2018

High-resolution organellar genome analysis of Triticum and Aegilops sheds new light on cytoplasm evolution in wheat

1 reference

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21 January 2018

Dating the monocot-dicot divergence and the origin of core eudicots using whole chloroplast genomes

1 reference

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21 January 2018

Phylogenetic analysis of 47 chloroplast genomes clarifies the contribution of wild species to the domesticated apple maternal line.

1 reference

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Chloroplast genome sequences from total DNA for plant identification.

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27 November 2018

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https://pubmed.ncbi.nlm.nih.gov/24614886

12 December 2020

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inferred from PubMed ID database lookup

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1 reference

https://pubmed.ncbi.nlm.nih.gov/24614886

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The rice nuclear genome continuously integrates, shuffles, and eliminates the chloroplast genome to cause chloroplast-nuclear DNA flux

1 reference

https://pubmed.ncbi.nlm.nih.gov/24614886

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative genomics of grasses promises a bountiful harvest

1 reference

https://pubmed.ncbi.nlm.nih.gov/24614886

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The origin and characterization of new nuclear genes originating from a cytoplasmic organellar genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/24614886

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0085761

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2014PLoSO...985761M

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OpenCitations bibliographic resource ID

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Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

ResearchGate publication ID

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