(Q28661336)

2

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Irina Mohorianu

object named as

Irina Mohorianu

1

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Tamas Dalmay

object named as

Tamas Dalmay

4

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author name string

John Wood

3

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Vincent Moulton

The tomato genome sequence provides insights into fleshy fruit evolution

5

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language of work or name

English

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publication date

July 2013

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published in

RNA Biology

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volume

10

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issue

7

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page(s)

1221-30

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cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

Rfam: Wikipedia, clans and the "decimal" release

17 March 2017

1 reference

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miRBase: integrating microRNA annotation and deep-sequencing data

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

Origin, biogenesis, and activity of plant microRNAs

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

Mapping and quantifying mammalian transcriptomes by RNA-Seq

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

An endogenous small interfering RNA pathway in Drosophila

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

Discovering microRNAs from deep sequencing data using miRDeep

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?

17 March 2017

1 reference

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The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

The many pathways of RNA degradation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

Diverse correlation patterns between microRNAs and their targets during tomato fruit development indicates different modes of microRNA actions

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

The UEA sRNA workbench: a suite of tools for analysing and visualizing next generation sequencing microRNA and small RNA datasets

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

Identifying small interfering RNA loci from high-throughput sequencing data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

MapMi: automated mapping of microRNA loci

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

Finding sRNA generative locales from high-throughput sequencing data with NiBLS.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

Computational and analytical framework for small RNA profiling by high-throughput sequencing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

PolIVb influences RNA-directed DNA methylation independently of its role in siRNA biogenesis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

Small RNAs in tomato fruit and leaf development.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

Bioinformatic prediction and experimental validation of a microRNA-directed tandem trans-acting siRNA cascade in Arabidopsis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

A two-hit trigger for siRNA biogenesis in plants

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

Post-transcriptional small RNA pathways in plants: mechanisms and regulations

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

The diversity of RNA silencing pathways in plants

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3849171

Deciphering the diversity of small RNAs in plants: the long and short of it.

3 June 2018

1 reference

A toolkit for analysing large-scale plant small RNA datasets.

21 January 2018

1 reference

A method to discover phased siRNA loci.

21 January 2018

1 reference

Profiling of short RNAs during fleshy fruit development reveals stage-specific sRNAome expression patterns.

21 January 2018

1 reference

PatMaN: rapid alignment of short sequences to large databases

21 January 2018

1 reference

The expanding world of small RNAs

21 January 2018

1 reference

A fast and symmetric DUST implementation to mask low-complexity DNA sequences

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23851377