(Q28681128)

English

Instrumentation bias in the use and evaluation of scientific software: recommendations for reproducible practices in the computational sciences

scientific article (publication date: 2013)

In more languages

default for all languages

No label defined

No description defined

Statements

scholarly article

0 references

0 references

Instrumentation bias in the use and evaluation of scientific software: recommendations for reproducible practices in the computational sciences (English)

0 references

reproducibility

0 references

1 reference

based on heuristic

inferred from title

0 references

research software

1 reference

based on heuristic

inferred from title

computational science

1 reference

based on heuristic

inferred from title

Nicholas J Tustison

object named as

Nicholas J Tustison

1

0 references

Satrajit S. Ghosh

object named as

Satrajit S Ghosh

5

0 references

object named as

Hans J Johnson

2

0 references

4

object named as

Arno Klein

0 references

author name string

Torsten Rohlfing

3

0 references

Luis Ibanez

6

0 references

Brian B Avants

7

0 references

language of work or name

0 references

publication date

2013

0 references

Frontiers in Neuroscience

0 references

7

0 references

162

0 references

Ten simple rules for the open development of scientific software

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

17 March 2017

3D Slicer as an image computing platform for the Quantitative Imaging Network

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

17 March 2017

A reproducible evaluation of ANTs similarity metric performance in brain image registration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

7 April 2017

Circular analysis in systems neuroscience: the dangers of double dipping

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

7 April 2017

S-HAMMER: hierarchical attribute-guided, symmetric diffeomorphic registration for MR brain images

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

3 June 2018

The effects of FreeSurfer version, workstation type, and Macintosh operating system version on anatomical volume and cortical thickness measurements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

3 June 2018

Automated segmentation of basal ganglia and deep brain structures in MRI of Parkinson's disease.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

3 June 2018

Voodoo and circularity errors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

3 June 2018

BEaST: brain extraction based on nonlocal segmentation technique

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

3 June 2018

Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in python

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

3 June 2018

AFNI: what a long strange trip it's been

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

3 June 2018

Image similarity and tissue overlaps as surrogates for image registration accuracy: widely used but unreliable

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

3 June 2018

N4ITK: improved N3 bias correction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

3 June 2018

Bias in estimation of hippocampal atrophy using deformation-based morphometry arises from asymmetric global normalization: an illustration in ADNI 3 T MRI data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

3 June 2018

The optimal template effect in hippocampus studies of diseased populations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

3 June 2018

Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

3 June 2018

Online resource for validation of brain segmentation methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

3 June 2018

Bias in analytic research

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

3 June 2018

Logical circularity in voxel-based analysis: normalization strategy may induce statistical bias

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

27 November 2018

A comparison of voxel and surface based cortical thickness estimation methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

27 November 2018

elastix: a toolbox for intensity-based medical image registration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766821

27 November 2018

Who is accountable?

1 reference

https://pubmed.ncbi.nlm.nih.gov/24058331

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Computational science: ...Error

1 reference

https://pubmed.ncbi.nlm.nih.gov/24058331

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.3389/FNINS.2013.00162

0 references

PMC publication ID

0 references

PubMed publication ID

0 references

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q28681128&oldid=1961701554"