(Q28727615)

Jennifer F Biddle

3

0 references

Katrin Knittel

6

Katrin Knittel

0 references

Rudolf Amann

4

Rudolf Amann

0 references

Andreas Teske

5

Andreas Teske

0 references

author name string

Kyoko Kubo

describes a project that uses

1

0 references

language of work or name

English

0 references

publication date

October 2012

0 references

published in

The ISME Journal

0 references

volume

6

0 references

issue

10

0 references

page(s)

1949-65

0 references

ImageQuant

1 reference

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3449235/fullTextXML

inferred from PubMed Central ID database lookup

cites work

Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Heterotrophic Archaea dominate sedimentary subsurface ecosystems off Peru

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Biogeographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean Margin

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Isolation of an autotrophic ammonia-oxidizing marine archaeon

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Methane-consuming archaebacteria in marine sediments

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Reclassification of the crenarchael orders and families in accordance with 16S rRNA sequence data

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Perspectives on archaeal diversity, thermophily and monophyly from environmental rRNA sequences

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Archaea in coastal marine environments

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Mesophilic Crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Accuracy and quality of massively parallel DNA pyrosequencing

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Genetic structure of three fosmid-fragments encoding 16S rRNA genes of the Miscellaneous Crenarchaeotic Group (MCG): implications for physiology and evolution of marine sedimentary archaea

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Environmental evidence for net methane production and oxidation in putative ANaerobic MEthanotrophic (ANME) archaea

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Active bacteria and archaea cells fixing bicarbonate in the dark along the water column of a stratified eutrophic lagoon

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Update of the All-Species Living Tree Project based on 16S and 23S rRNA sequence analyses

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Relevance of a crenarchaeotal subcluster related to Candidatus Nitrosopumilus maritimus to ammonia oxidation in the suboxic zone of the central Baltic Sea.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Characterization of methanogenic Archaea in the leachate of a closed municipal solid waste landfill

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Anaerobic oxidation of methane: progress with an unknown process

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

An uncultivated crenarchaeota contains functional bacteriochlorophyll a synthase

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Significant contribution of Archaea to extant biomass in marine subsurface sediments

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Identity and abundance of active sulfate-reducing bacteria in deep tidal flat sediments determined by directed cultivation and CARD-FISH analysis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Microbial population structures in the deep marine biosphere

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Use of 16S rRNA gene based clone libraries to assess microbial communities potentially involved in anaerobic methane oxidation in a Mediterranean cold seep

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Novel microbial communities of the Haakon Mosby mud volcano and their role as a methane sink

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Prokaryotic community composition and biogeochemical processes in deep subseafloor sediments from the Peru Margin

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

New screening software shows that most recent large 16S rRNA gene clone libraries contain chimeras

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Stratified communities of active Archaea in deep marine subsurface sediments

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Distribution, localization, and phylogeny of abundant populations of Crenarchaeota in anaerobic granular sludge

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Diversity of functional genes of methanogens, methanotrophs and sulfate reducers in deep-sea hydrothermal environments

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Diversity and distribution of methanotrophic archaea at cold seeps

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Phylogenetic characterization of methanogenic assemblages in eutrophic and oligotrophic areas of the Florida Everglades

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Combining catalyzed reporter deposition-fluorescence in situ hybridization and microautoradiography to detect substrate utilization by bacteria and Archaea in the deep ocean.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Microbial communities associated with geological horizons in coastal subseafloor sediments from the sea of okhotsk.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Bacterial diversity and sulfur cycling in a mesophilic sulfide-rich spring

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Diversity and abundance of Crenarchaeota in terrestrial habitats studied by 16S RNA surveys and real time PCR.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Fluorescence in situ hybridization of 16S rRNA gene clones (Clone-FISH) for probe validation and screening of clone libraries

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Archaeal diversity in waters from deep South African gold mines

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Axial differences in community structure of Crenarchaeota and Euryarchaeota in the highly compartmentalized gut of the soil-feeding termite Cubitermes orthognathus

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Archaeal dominance in the mesopelagic zone of the Pacific Ocean

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Community structure, cellular rRNA content, and activity of sulfate-reducing bacteria in marine arctic sediments.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Population structure and phylogenetic characterization of marine benthic Archaea in deep-sea sediments

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Genetic diversity of archaea in deep-sea hydrothermal vent environments

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Recovery and phylogenetic analysis of archaeal rRNA sequences from continental shelf sediments

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Crenarchaeota in Lake Michigan sediment

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Wide diversity of Crenarchaeota.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Direct ribosome isolation from soil to extract bacterial rRNA for community analysis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Use of phylogenetically based hybridization probes for studies of ruminal microbial ecology

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

Novel major archaebacterial group from marine plankton

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3449235

A marine microbial consortium apparently mediating anaerobic oxidation of methane

3 June 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.37

Ongoing modification of Mediterranean Pleistocene sapropels mediated by prokaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.37

In situ fluxes and zonation of microbial activity in surface sediments of the Håkon Mosby Mud Volcano

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.37

Distributions of Microbial Activities in Deep Subseafloor Sediments

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.37

Physiological and molecular characterization of a microbial community established in unsaturated, petroleum-contaminated soil

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.37

Activity, Distribution, and Diversity of Sulfate Reducers and Other Bacteria in Sediments above Gas Hydrate (Cascadia Margin, Oregon)

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.37

Halotaxis of cyanobacteria in an intertidal hypersaline microbial mat.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.37

Impact of natural oil and higher hydrocarbons on microbial diversity, distribution, and activity in Gulf of Mexico cold-seep sediments

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.37

Intact polar lipids of anaerobic methanotrophic archaea and associated bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.37

Anaerobic oxidation of methane above gas hydrates at Hydrate Ridge, NE Pacific Ocean

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.37

Prokaryotic functional diversity in different biogeochemical depth zones in tidal sediments of the Severn Estuary, UK, revealed by stable-isotope probing

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.37

Deep sub-seafloor prokaryotes stimulated at interfaces over geological time

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.37

Filamentous sulfur bacteria, Beggiatoa spp., in arctic marine sediments (Svalbard, 79 degrees N)

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22551871

12 December 2020

inferred from PubMed ID database lookup

Identification of novel Archaea in bacterioplankton of a boreal forest lake by phylogenetic analysis and fluorescent in situ hybridization(1)

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22551871

12 December 2020

inferred from PubMed ID database lookup

Sedimentary membrane lipids recycled by deep-sea benthic archaea

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.37

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/ISMEJ.2012.37

1 reference

Dimensions Publication ID

1016487667

0 references

1 reference

1 reference

PubMed publication ID

22551871

1 reference