(Q28748995)

English

Paleopolyploidy in the Brassicales: analyses of the Cleome transcriptome elucidate the history of genome duplications in Arabidopsis and other Brassicales

scientific article (publication date: 5 October 2009)

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scholarly article

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Paleopolyploidy in the Brassicales: analyses of the Cleome transcriptome elucidate the history of genome duplications in Arabidopsis and other Brassicales (English)

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whole genome duplication

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based on heuristic

inferred from title

2

object named as

Heiko Vogel

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author name string

Michael S Barker

1

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M Eric Schranz

3

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language of work or name

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publication date

5 October 2009

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Genome Biology and Evolution

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1

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0

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391-9

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The frequency of polyploid speciation in vascular plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

16 March 2017

Unraveling ancient hexaploidy through multiply-aligned angiosperm gene maps

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

16 March 2017

Multiple paleopolyploidizations during the evolution of the Compositae reveal parallel patterns of duplicate gene retention after millions of years

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

16 March 2017

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

1 reference

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16 March 2017

Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia

1 reference

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16 March 2017

Widespread genome duplications throughout the history of flowering plants

1 reference

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16 March 2017

PHYML Online--a web server for fast maximum likelihood-based phylogenetic inference

1 reference

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16 March 2017

Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

16 March 2017

MUSCLE: multiple sequence alignment with high accuracy and high throughput

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

16 March 2017

Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events

1 reference

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16 March 2017

PatternHunter: faster and more sensitive homology search

1 reference

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16 March 2017

The evolutionary fate and consequences of duplicate genes

1 reference

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16 March 2017

Comparing sequenced segments of the tomato and Arabidopsis genomes: large-scale duplication followed by selective gene loss creates a network of synteny

1 reference

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16 March 2017

MODELTEST: testing the model of DNA substitution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

16 March 2017

PAML: a program package for phylogenetic analysis by maximum likelihood

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

16 March 2017

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

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16 March 2017

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

16 March 2017

PairWise and SearchWise: finding the optimal alignment in a simultaneous comparison of a protein profile against all DNA translation frames

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

16 March 2017

A codon-based model of nucleotide substitution for protein-coding DNA sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

16 March 2017

Molecular evolution of alcohol dehydrogenase 1 in members of the grass family

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

16 March 2017

A greedy algorithm for aligning DNA sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

7 April 2017

Database resources of the National Center for Biotechnology Information

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

7 April 2017

Polyploidy and angiosperm diversification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

7 April 2017

Rates of molecular evolution are linked to life history in flowering plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

7 April 2017

Comparative evolutionary analysis of chalcone synthase and alcohol dehydrogenase loci in Arabidopsis, Arabis, and related genera (Brassicaceae)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

7 April 2017

Bias in plant gene content following different sorts of duplication: tandem, whole-genome, segmental, or by transposition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

3 June 2018

Evolutionary genetics of genome merger and doubling in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

3 June 2018

The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).

1 reference

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3 June 2018

Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotype

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

3 June 2018

Gene-balanced duplications, like tetraploidy, provide predictable drive to increase morphological complexity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

3 June 2018

Genome duplication and the origin of angiosperms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

3 June 2018

Buffering of crucial functions by paleologous duplicated genes may contribute cyclicality to angiosperm genome duplication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

3 June 2018

EST data suggest that poplar is an ancient polyploid

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

3 June 2018

Modeling gene and genome duplications in eukaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

3 June 2018

RevTrans: Multiple alignment of coding DNA from aligned amino acid sequences.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

3 June 2018

A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817432

3 June 2018

The TIGR gene indices: reconstruction and representation of expressed gene sequences

1 reference

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3 June 2018

Phylogenetic utility of the nuclear gene arginine decarboxylase: an example from Brassicaceae

1 reference

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3 June 2018

Fossil calibration of molecular divergence infers a moderate mutation rate and recent radiations for pinus

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVP040

21 January 2018

The age of the Arabidopsis thaliana genome duplication

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVP040

21 January 2018

Finding and comparing syntenic regions among Arabidopsis and the outgroups papaya, poplar, and grape: CoGe with rosids

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVP040

21 January 2018

Placing paleopolyploidy in relation to taxon divergence: a phylogenetic analysis in legumes using 39 gene families

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVP040

21 January 2018

Independent ancient polyploidy events in the sister families Brassicaceae and Cleomaceae.

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVP040

21 January 2018

Synteny and Collinearity in Plant Genomes

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVP040

21 January 2018

Comparative genomics of Brassica oleracea and Arabidopsis thaliana reveal gene loss, fragmentation, and dispersal after polyploidy

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVP040

21 January 2018

The origins of genomic duplications in Arabidopsis.

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVP040

21 January 2018

Robustness--it's not where you think it is.

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVP040

21 January 2018

Mining EST databases to resolve evolutionary events in major crop species

1 reference

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27 November 2018

Identifiers

10.1093/GBE/EVP040

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

ResearchGate publication ID

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