(Q28749712)

22 June 2017

title

A whole genome Bayesian scan for adaptive genetic divergence in West African cattle (English)

1 reference

22 June 2017

main subject

whole genome sequencing

1 reference

4

Florence Jaffrézic

0 references

author name string

Mathieu Gautier

1

1 reference

22 June 2017

Laurence Flori

2

1 reference

22 June 2017

Andrea Riebler

3

1 reference

22 June 2017

Florence Jaffrézic

4

1 reference

22 June 2017

Denis Laloé

5

1 reference

22 June 2017

Ivo Gut

6

1 reference

22 June 2017

Katayoun Moazami-Goudarzi

7

1 reference

22 June 2017

Jean-Louis Foulley

8

1 reference

22 June 2017

language of work or name

English

0 references

publication date

21 November 2009

1 reference

22 June 2017

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22 June 2017

volume

10

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22 June 2017

page(s)

550

1 reference

Development and characterization of a high density SNP genotyping assay for cattle

22 June 2017

cites work

1 reference

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Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds

16 March 2017

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The genome sequence of taurine cattle: a window to ruminant biology and evolution

16 March 2017

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TRIM21 is an IgG receptor that is structurally, thermodynamically, and kinetically conserved

16 March 2017

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Genetic evaluation of the serotonergic system in chronic fatigue syndrome

16 March 2017

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EVOLUTION IN MENDELIAN POPULATIONS

16 March 2017

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Population structure and eigenanalysis

16 March 2017

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Aspects of genetic susceptibility to human infectious diseases

16 March 2017

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HIV and the chemokine system: 10 years later

16 March 2017

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Identification of novel mutations in the SEMA4A gene associated with retinal degenerative diseases

16 March 2017

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A note on exact tests of Hardy-Weinberg equilibrium

16 March 2017

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Haploview: analysis and visualization of LD and haplotype maps

16 March 2017

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A hierarchy of nuclear localization signals governs the import of the regulatory factor X complex subunits and MHC class II expression

16 March 2017

1 reference

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Statistical significance for genomewide studies

16 March 2017

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MAGI-1: a widely expressed, alternatively spliced tight junction protein

16 March 2017

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Inference of population structure using multilocus genotype data

16 March 2017

1 reference

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Mutations in a new gene, encoding a zinc-finger protein, cause tricho-rhino-phalangeal syndrome type I

16 March 2017

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16 March 2017

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Null mutation of endothelin receptor type B gene in spotting lethal rats causes aganglionic megacolon and white coat color

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

genepop'007: a complete re-implementation of the genepop software for Windows and Linux

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

APE: Analyses of Phylogenetics and Evolution in R language

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

High resolution of human evolutionary trees with polymorphic microsatellites

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

7 April 2017

Isolation by Distance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

The genome response to artificial selection: a case study in dairy cattle

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

A Bayesian hierarchical model for analysis of SNP diversity in multilocus, multipopulation samples

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Detecting loci under selection in a hierarchically structured population

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

TRIM21 is essential to sustain IFN regulatory factor 3 activation during antiviral response

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Molecular evolution of the antiretroviral TRIM5 gene.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: a Bayesian perspective

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Molecular evolution of the keratin associated protein gene family in mammals, role in the evolution of mammalian hair

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

A position effect on TRPS1 is associated with Ambras syndrome in humans and the Koala phenotype in mice

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

CXCR4-CCR5: a couple modulating T cell functions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Dlk1 influences differentiation and function of B lymphocytes.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

An approximate Bayesian computation approach to overcome biases that arise when using amplified fragment length polymorphism markers to study population structure

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Bayesian variable selection for detecting adaptive genomic differences among populations

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Biology of epidermal and hair pigmentation in cattle: a mini-review

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Genetic and haplotypic structure in 14 European and African cattle breeds

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Balancing selection and the evolution of functional polymorphism in Old World monkey TRIM5alpha

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Association of BoLA-DRB3.2 alleles with tick (Boophilus microplus) resistance in cattle.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

A locally adaptive statistical procedure (LAP) to identify differentially expressed chromosomal regions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Contrasting effects of natural selection on human and chimpanzee CC chemokine receptor 5

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

TICAM-1 and TICAM-2: toll-like receptor adapters that participate in induction of type 1 interferons

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Long distance control of MHC class II expression by multiple distal enhancers regulated by regulatory factor X complex and CIITA.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Physiological and cellular adaptations of zebu cattle to thermal stress

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Invited review: formation of keratins in the bovine claw: roles of hormones, minerals, and vitamins in functional claw integrity

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Perspective: detecting adaptive molecular polymorphism: lessons from the MHC

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Genetic characterization of southwestern European bovine breeds: a historical and biogeographical reassessment with a set of 16 microsatellites

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Mapping of quantitative trait loci controlling trypanotolerance in a cross of tolerant West African N'Dama and susceptible East African Boran cattle

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Likelihood-based inference for genetic correlation coefficients

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Class IV semaphorin Sema4A enhances T-cell activation and interacts with Tim-2.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Is a multivariate consensus representation of genetic relationships among populations always meaningful?

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

A strong signature of balancing selection in the 5' cis-regulatory region of CCR5.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

African pastoralism: genetic imprints of origins and migrations.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Immunogenetic influences on tick resistance in African cattle with particular reference to trypanotolerant N'Dama (Bos taurus) and trypanosusceptible Gobra zebu (Bos indicus) cattle

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Balancing selection and MHC.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Serotonin and the regulation of mammalian circadian rhythmicity.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

The RFX complex is crucial for the constitutive and CIITA-mediated transactivation of MHC class I and beta2-microglobulin genes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Detection of selection signatures within candidate regions underlying trypanotolerance in outbred cattle populations

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Correcting for ascertainment bias in the inference of population structure.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Differences in thermoregulatory ability between slick-haired and wild-type lactating Holstein cows in response to acute heat stress

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

The structure of linkage disequilibrium around a selective sweep

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Noelins modulate the timing of neuronal differentiation during development

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Fine mapping of the polled locus to a 1-Mb region on bovine chromosome 1q12.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Admixture and diversity in West African cattle populations

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Identifying adaptive genetic divergence among populations from genome scans.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Cloning, chromosome localization and features of a novel human gene, MATH2.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Ig alpha and Ig beta are required for efficient trafficking to late endosomes and to enhance antigen presentation.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Reduced responsiveness of the hypothalamic-pituitary-adrenal axis in Boran (Bos inducus) cattle infected with Trypanosoma congolense.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784811

Analysis of novel and recurrent mutations responsible for the tricho-rhino-phalangeal syndromes

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19930592

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Linkage disequilibrium in finite populations

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19930592

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-10-550

1 reference

Dimensions Publication ID

22 June 2017

1027370050

0 references

OpenCitations bibliographic resource ID

2483869

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2483869

1 reference