(Q28910173)

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Co-motif discovery identifies an Esrrb-Sox2-DNA ternary complex as a mediator of transcriptional differences between mouse embryonic and epiblast stem cells

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scholarly article

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PubMed publication ID

7 March 2017

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23169531%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

Co-motif discovery identifies an Esrrb-Sox2-DNA ternary complex as a mediator of transcriptional differences between mouse embryonic and epiblast stem cells (English)

2 references

PubMed publication ID

7 March 2017

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23169531%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

Estrogen related receptor, beta

1 reference

GOA release 2020-03-11

SRY (sex determining region Y)-box 2

1 reference

GOA release 2020-03-11

SMAD family member 1

1 reference

GOA release 2020-03-11

Andrew Paul Hutchins

1

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23169531%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

3

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23169531%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

7

1 reference

Europe PubMed Central

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18 February 2020

8

1 reference

Europe PubMed Central

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18 February 2020

author name string

Siew Hua Choo

2

2 references

PubMed publication ID

7 March 2017

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23169531%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

Mehran Rahmani

4

2 references

PubMed publication ID

7 March 2017

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23169531%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

Chow Thai Woon

5

2 references

PubMed publication ID

7 March 2017

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23169531%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

Calista Keow Leng Ng

6

2 references

PubMed publication ID

7 March 2017

Europe PubMed Central

PubMed publication ID

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18 February 2020

publication date

1 February 2013

2 references

PubMed publication ID

7 March 2017

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23169531%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

2 references

PubMed publication ID

7 March 2017

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23169531%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

31

2 references

PubMed publication ID

7 March 2017

Europe PubMed Central

PubMed publication ID

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18 February 2020

2

2 references

PubMed publication ID

7 March 2017

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23169531%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

269-281

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23169531%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

Promoter analysis: gene regulatory motif identification with A-GLAM.

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

MEME SUITE: tools for motif discovery and searching

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Inferring transcription factor complexes from ChIP-seq data

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Exhaustive search for over-represented DNA sequence motifs with CisFinder

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Diversity and complexity in DNA recognition by transcription factors

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Multipotent cell lineages in early mouse development depend on SOX2 function

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Interplay of SOX and POU factors in regulation of the Nestin gene in neural primordial cells

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Sox17 regulates organ lineage segregation of ventral foregut progenitor cells

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Sox17 promotes differentiation in mouse embryonic stem cells by directly regulating extraembryonic gene expression and indirectly antagonizing self-renewal

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Origin and formation of the first two distinct cell types of the inner cell mass in the mouse embryo.

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Generation of induced pluripotent stem cells without Myc from mouse and human fibroblasts

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Interplay of Pax6 and SOX2 in lens development as a paradigm of genetic switch mechanisms for cell differentiation

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Regulation of the FGF-4 gene by a complex distal enhancer that functions in part as an enhanceosome

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Integration of external signaling pathways with the core transcriptional network in embryonic stem cells

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

An extended transcriptional network for pluripotency of embryonic stem cells

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Proneural bHLH and Brn proteins coregulate a neurogenic program through cooperative binding to a conserved DNA motif

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Monomeric complex of human orphan estrogen related receptor-2 with DNA: a pseudo-dimer interface mediates extended half-site recognition

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Identification of a Polyoxometalate Inhibitor of the DNA Binding Activity of Sox2

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Structure of Smad1 MH1/DNA complex reveals distinctive rearrangements of BMP and TGF- effectors

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Transcriptional regulation of nanog by OCT4 and SOX2.

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Deciphering the Sox-Oct partner code by quantitative cooperativity measurements

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

A rapid micropreparation technique for extraction of DNA-binding proteins from limiting numbers of mammalian cells

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Reconstitution of the mouse germ cell specification pathway in culture by pluripotent stem cells

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Reprogramming of fibroblasts into induced pluripotent stem cells with orphan nuclear receptor Esrrb.

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

HDAC1 regulates pluripotency and lineage specific transcriptional networks in embryonic and trophoblast stem cells

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

BMP signaling induces visceral endoderm differentiation of XEN cells and parietal endoderm

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Fractal properties of the human genome.

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Structural basis for the cooperative DNA recognition by Smad4 MH1 dimers

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Interaction of Smad complexes with tripartite DNA-binding sites

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Lineage regulators direct BMP and Wnt pathways to cell-specific programs during differentiation and regeneration

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Crystal structure of a POU/HMG/DNA ternary complex suggests differential assembly of Oct4 and Sox2 on two enhancers

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

The structure of Sox17 bound to DNA reveals a conserved bending topology but selective protein interaction platforms

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Promotion of trophoblast stem cell proliferation by FGF4

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

New cell lines from mouse epiblast share defining features with human embryonic stem cells

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Derivation of pluripotent epiblast stem cells from mammalian embryos

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Placental abnormalities in mouse embryos lacking the orphan nuclear receptor ERR-beta

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Examination of transcriptional networks reveals an important role for TCFAP2C, SMARCA4, and EOMES in trophoblast stem cell maintenance

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

A gene atlas of the mouse and human protein-encoding transcriptomes

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Transcription factor heterogeneity and epiblast pluripotency.

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Dax-1 knockdown in mouse embryonic stem cells induces loss of pluripotency and multilineage differentiation

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Dissecting self-renewal in stem cells with RNA interference

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Inner cell mass-specific expression of a cell adhesion molecule (PECAM-1/CD31) in the mouse blastocyst

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Combinatorial binding of transcription factors in the pluripotency control regions of the genome

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Pluripotency governed by Sox2 via regulation of Oct3/4 expression in mouse embryonic stem cells.

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Single-cell expression analyses during cellular reprogramming reveal an early stochastic and a late hierarchic phase

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Klf4 reverts developmentally programmed restriction of ground state pluripotency

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

A genome-wide screen in EpiSCs identifies Nr5a nuclear receptors as potent inducers of ground state pluripotency.

1 reference

https://api.crossref.org/works/10.1002%2FSTEM.1279

21 January 2018

Identifiers

10.1002/STEM.1279

2 references

PubMed publication ID

7 March 2017

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23169531%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

PubMed publication ID

2 references

PubMed publication ID

7 March 2017

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23169531%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

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