(Q28959138)

2

0 references

Xizhou Diao

3

0 references

Zhifang Liu

4

0 references

Kun Li

5

0 references

Yujin Wu

6

0 references

Qianjin Liang

7

0 references

Hui Wang

8

0 references

Changling Huang

describes a project that uses

9

0 references

language of work or name

English

0 references

publication date

22 November 2016

0 references

published in

BMC Genomics

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volume

17

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issue

1

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page(s)

959

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DESeq2

object named as

R package DESeq

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

DESeq2

0 references

cites work

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Progress toward understanding heterosis in crop plants

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Ploidy and Hybridity Effects on Growth Vigor and Gene Expression in Arabidopsis thaliana Hybrids and Their Parents

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Towards the molecular basis of heterosis

19 March 2017

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Conserved noncoding genomic sequences associated with a flowering-time quantitative trait locus in maize

19 March 2017

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barren inflorescence2 Encodes a co-ortholog of the PINOID serine/threonine kinase and is required for organogenesis during inflorescence and vegetative development in maize

19 March 2017

1 reference

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Allelic variation and heterosis in maize: how do two halves make more than a whole?

19 March 2017

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Heterosis: revisiting the magic

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In Search of the Molecular Basis of Heterosis

19 March 2017

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Towards a better understanding of the genetic and physiological basis for nitrogen use efficiency in maize

19 March 2017

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Cis-regulatory elements: molecular mechanisms and evolutionary processes underlying divergence

19 March 2017

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Regulatory divergence between parental alleles determines gene expression patterns in hybrids

6 April 2017

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Extensive cis-regulatory variation robust to environmental perturbation in Arabidopsis

3 June 2018

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Global RNA sequencing reveals that genotype-dependent allele-specific expression contributes to differential expression in rice F1 hybrids

3 June 2018

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Identification of transcriptome SNPs for assessing allele-specific gene expression in a super-hybrid rice Xieyou9308.

3 June 2018

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Grass meristems I: shoot apical meristem maintenance, axillary meristem determinacy and the floral transition.

3 June 2018

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Grass meristems II: inflorescence architecture, flower development and meristem fate.

3 June 2018

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Homoeolog expression bias and expression level dominance in allopolyploid cotton

3 June 2018

1 reference

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Complementation contributes to transcriptome complexity in maize (Zea mays L.) hybrids relative to their inbred parents

3 June 2018

1 reference

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Comparative Transcriptional Profiling and Preliminary Study on Heterosis Mechanism of Super-Hybrid Rice

3 June 2018

1 reference

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Natural selection on cis and trans regulation in yeasts

3 June 2018

1 reference

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Regulatory divergence in Drosophila revealed by mRNA-seq.

3 June 2018

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Global epigenetic and transcriptional trends among two rice subspecies and their reciprocal hybrids

3 June 2018

1 reference

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bearded-ear encodes a MADS box transcription factor critical for maize floral development

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

A transcriptomic analysis of superhybrid rice LYP9 and its parents

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

Gene expression analyses in maize inbreds and hybrids with varying levels of heterosis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

Independent effects of cis- and trans-regulatory variation on gene expression in Drosophila melanogaster

3 June 2018

1 reference

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Genome-wide allele-specific expression analysis using Massively Parallel Signature Sequencing (MPSS) reveals cis- and trans-effects on gene expression in maize hybrid meristem tissue.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

Extensive allelic variation in gene expression in populus F1 hybrids

3 June 2018

1 reference

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Differential gene expression in an elite hybrid rice cultivar (Oryza sativa, L) and its parental lines based on SAGE data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

delayed flowering1 Encodes a basic leucine zipper protein that mediates floral inductive signals at the shoot apex in maize

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

Comparative expression profiling in meristems of inbred-hybrid triplets of maize based on morphological investigations of heterosis for plant height

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression patterns in the F1 hybrid

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

A trehalose metabolic enzyme controls inflorescence architecture in maize

3 June 2018

1 reference

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All possible modes of gene action are observed in a global comparison of gene expression in a maize F1 hybrid and its inbred parents

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

ramosa2 encodes a LATERAL ORGAN BOUNDARY domain protein that determines the fate of stem cells in branch meristems of maize

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

Genomewide nonadditive gene regulation in Arabidopsis allotetraploids

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

Allele-specific, bidirectional silencing of an alcohol dehydrogenase gene in different organs of interspecific diploid cotton hybrids

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

Architecture of floral branch systems in maize and related grasses

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

Genetics and evolution of inflorescence and flower development in grasses

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

Nonadditive gene expression in diploid and triploid hybrids of maize

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

Allelic variation of gene expression in maize hybrids.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

Gene expression of a gene family in maize based on noncollinear haplotypes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

Duplicate FLORICAULA/LEAFY homologs zfl1 and zfl2 control inflorescence architecture and flower patterning in maize

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

Expression patterns and mutant phenotype of teosinte branched1 correlate with growth suppression in maize and teosinte

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

The control of spikelet meristem identity by the branched silkless1 gene in maize

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

Function and evolution of the plant MADS-box gene family

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

Biotechnology in the 1930s: the development of hybrid maize.

3 June 2018

1 reference

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mRNA and Small RNA Transcriptomes Reveal Insights into Dynamic Homoeolog Regulation of Allopolyploid Heterosis in Nascent Hexaploid Wheat

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-016-3296-8

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-016-3296-8

Allele-specific expression patterns reveal biases and embryo-specific parent-of-origin effects in hybrid maize.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-016-3296-8

Evolutionary changes in cis and trans gene regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-016-3296-8

Cis- and trans-regulatory divergence between progenitor species determines gene-expression novelty in Arabidopsis allopolyploids.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-016-3296-8

Genome-wide analysis of gene expression profiles during ear development of maize.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-016-3296-8

Homoeolog expression bias and expression level dominance in allopolyploids.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-016-3296-8

A yeast hybrid provides insight into the evolution of gene expression regulation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-016-3296-8

Alternative Hypotheses of Hybrid Vigor

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120533

Genome-wide transcript analysis of maize hybrids: allelic additive gene expression and yield heterosis

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27875998

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Dominance of Linked Factors as a Means of Accounting for Heterosis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27875998

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

THE MENDELIAN THEORY OF HEREDITY AND THE AUGMENTATION OF VIGOR

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27875998