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Empirical Bayes analysis of RNA-seq data for detection of gene expression heterosis
scientific article (publication date: December 2015)
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scholarly article
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Europe PubMed Central
PMC publication ID
4852395
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27147815%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
title
Empirical Bayes analysis of RNA-seq data for detection of gene expression heterosis
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
4852395
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27147815%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
main subject
heterosis
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RNA analysis
1 reference
based on heuristic
inferred from title
RNA sequencing
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based on heuristic
inferred from title
RNA-Seq
1 reference
based on heuristic
inferred from title
author
William Landau
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
4852395
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27147815%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
Dan Nettleton
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMC publication ID
4852395
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27147815%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
author name string
Jarad Niemi
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
4852395
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27147815%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
Eric Mittman
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
4852395
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27147815%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
language of work or name
English
0 references
publication date
1 December 2015
1 reference
stated in
Europe PubMed Central
PMC publication ID
4852395
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27147815%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
published in
Journal of Agricultural, Biological, and Environmental Statistics
1 reference
stated in
Europe PubMed Central
PMC publication ID
4852395
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27147815%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
volume
20
1 reference
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Europe PubMed Central
PMC publication ID
4852395
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27147815%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
issue
4
1 reference
stated in
Europe PubMed Central
PMC publication ID
4852395
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27147815%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
page(s)
614-628
1 reference
stated in
Europe PubMed Central
PMC publication ID
4852395
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27147815%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
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WikiProject Mathematics
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cites work
Genomic and epigenetic insights into the molecular bases of heterosis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395
retrieved
19 March 2017
A scaling normalization method for differential expression analysis of RNA-seq data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395
retrieved
19 March 2017
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395
retrieved
19 March 2017
Allelic variation and heterosis in maize: how do two halves make more than a whole?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395
retrieved
19 March 2017
Bioconductor: open software development for computational biology and bioinformatics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395
retrieved
19 March 2017
Estimation and Testing of Gene Expression Heterosis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395
retrieved
3 June 2018
ShrinkBayes: a versatile R-package for analysis of count-based sequencing data in complex study designs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395
retrieved
3 June 2018
A computational workflow to identify allele-specific expression and epigenetic modification in maize
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395
retrieved
3 June 2018
RNA-seq analysis of allele-specific expression, hybrid effects, and regulatory divergence in hybrids compared with their parents from natural populations
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395
retrieved
3 June 2018
Complementation contributes to transcriptome complexity in maize (Zea mays L.) hybrids relative to their inbred parents
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395
retrieved
3 June 2018
baySeq: empirical Bayesian methods for identifying differential expression in sequence count data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395
retrieved
3 June 2018
Moderated statistical tests for assessing differences in tag abundance
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395
retrieved
3 June 2018
All possible modes of gene action are observed in a global comparison of gene expression in a maize F1 hybrid and its inbred parents
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395
retrieved
3 June 2018
Inference from Iterative Simulation Using Multiple Sequences
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1007%2FS13253-015-0230-5
retrieved
21 January 2018
The Bayesian Lasso
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1007%2FS13253-015-0230-5
retrieved
21 January 2018
Identifiers
DOI
10.1007/S13253-015-0230-5
1 reference
stated in
Europe PubMed Central
PMC publication ID
4852395
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27147815%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
PMC publication ID
4852395
1 reference
stated in
Europe PubMed Central
PMC publication ID
4852395
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27147815%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
PubMed publication ID
27147815
1 reference
stated in
Europe PubMed Central
PMC publication ID
4852395
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27147815%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
zbMATH Open document ID
1329.62447
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