(Q29614444)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19377475%20AND%20SRC:MED&resulttype=core&format=json

26 January 2020

title

The regulated retrotransposon transcriptome of mammalian cells (English)

2 references

PubMed

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=19377475

30 April 2017

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26 January 2020

0 references

0 references

3

1 reference

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26 January 2020

Charles Plessy

5

1 reference

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26 January 2020

Katharine M Irvine

6

1 reference

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26 January 2020

Kate Schroder

7

1 reference

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26 January 2020

Nicole Cloonan

8

1 reference

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26 January 2020

Timo Lassmann

10

1 reference

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26 January 2020

Hazuki Takahashi

14

1 reference

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26 January 2020

Alistair Forrest

16

1 reference

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26 January 2020

David A Hume

19

1 reference

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26 January 2020

Sean M. Grimmond

21

1 reference

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26 January 2020

Piero Carninci

22

1 reference

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26 January 2020

author name string

Geoffrey J Faulkner

1

1 reference

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26 January 2020

Yasumasa Kimura

2

1 reference

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26 January 2020

Shivangi Wani

4

1 reference

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26 January 2020

Anita L Steptoe

9

1 reference

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26 January 2020

Kazunori Waki

11

1 reference

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26 January 2020

Nadine Hornig

12

1 reference

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26 January 2020

Takahiro Arakawa

13

1 reference

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26 January 2020

Jun Kawai

15

1 reference

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26 January 2020

Harukazu Suzuki

17

1 reference

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26 January 2020

Yoshihide Hayashizaki

18

1 reference

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26 January 2020

Valerio Orlando

20

1 reference

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26 January 2020

language of work or name

1 reference

30 April 2017

publication date

19 April 2009

1 reference

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26 January 2020

2 references

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30 April 2017

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26 January 2020

volume

41

2 references

PubMed

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30 April 2017

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26 January 2020

page(s)

563-571

1 reference

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26 January 2020

issue

5

2 references

PubMed

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30 April 2017

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https://scigraph.springernature.com/pub.10.1038/ng.368

26 January 2020

exact match

0 references

cites work

The diploid genome sequence of an individual human

1 reference

Mobile elements: drivers of genome evolution

1 May 2017

1 reference

Antisense promoter of human L1 retrotransposon drives transcription of adjacent cellular genes

1 May 2017

1 reference

Alu repeats and human genomic diversity

1 May 2017

1 reference

Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes

1 May 2017

1 reference

Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution

1 May 2017

1 reference

Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage

1 May 2017

1 reference

The transcriptional landscape of the mammalian genome

1 May 2017

1 reference

Genome-wide analysis of mammalian promoter architecture and evolution

1 May 2017

1 reference

Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes

1 May 2017

1 reference

Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions

1 May 2017

1 reference

Antisense transcription in the mammalian transcriptome

1 May 2017

1 reference

RNA maps reveal new RNA classes and a possible function for pervasive transcription

1 May 2017

1 reference

Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes

1 May 2017

1 reference

Genome sequencing in microfabricated high-density picolitre reactors

1 May 2017

1 reference

Open source clustering software

1 May 2017

1 reference

Comparative sequencing provides insights about the structure and conservation of marsupial and monotreme genomes

1 May 2017

1 reference

Current topics in genome evolution: molecular mechanisms of new gene formation.

21 January 2018

1 reference

Useful 'junk': Alu RNAs in the human transcriptome.

21 January 2018

1 reference

Evolutionary impact of human Alu repetitive elements.

21 January 2018

1 reference

Retrotransposons regulate host genes in mouse oocytes and preimplantation embryos.

21 January 2018

1 reference

Transcriptional disruption by the L1 retrotransposon and implications for mammalian transcriptomes.

21 January 2018

1 reference

Long L1 insertions in human gene introns specifically reduce the content of corresponding primary transcripts.

21 January 2018

1 reference

L1 retrotransposition is suppressed by endogenously encoded small interfering RNAs in human cultured cells.

21 January 2018

1 reference

Controlling elements and the gene

21 January 2018

1 reference

Developmentally regulated activation of a SINE B2 repeat as a domain boundary in organogenesis.

21 January 2018

1 reference

RNA interference machinery influences the nuclear organization of a chromatin insulator.

21 January 2018

1 reference

Repression of the human dihydrofolate reductase gene by a non-coding interfering transcript.

21 January 2018

1 reference

Transcriptional interference: an unexpected layer of complexity in gene regulation.

21 January 2018

1 reference

RNA at the steering wheel

21 January 2018

1 reference

Human cis natural antisense transcripts initiated by transposable elements.

21 January 2018

1 reference

Identification, characterization, and cell specificity of a human LINE-1 promoter

21 January 2018

1 reference

L1 antisense promoter drives tissue-specific transcription of human genes

21 January 2018

1 reference

Many human genes are transcribed from the antisense promoter of L1 retrotransposon.

21 January 2018

1 reference

A rescue strategy for multimapping short sequence tags refines surveys of transcriptional activity by CAGE.

21 January 2018

1 reference

Mammalian RNA polymerase II core promoters: insights from genome-wide studies.

21 January 2018

1 reference

High-throughput verification of transcriptional starting sites by Deep-RACE.

21 January 2018

1 reference

Intergenic transcription through a polycomb group response element counteracts silencing.

21 January 2018

1 reference

The imprinted Air ncRNA is an atypical RNAPII transcript that evades splicing and escapes nuclear export

21 January 2018

1 reference

Progress in understanding the biology of the human mutagen LINE-1.

21 January 2018

1 reference

LINE-1 retrotransposition in human embryonic stem cells.

21 January 2018

1 reference

L1 retrotransposition can occur early in human embryonic development.

21 January 2018

1 reference

Alu element-mediated gene silencing.

21 January 2018

1 reference

RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=19377475

21 January 2018

Identifiers

3 references

30 April 2017

Consolidated OpenCitations Corpus – April 2017

170114

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19377475%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

26 January 2020

1027476610

0 references

170114

1 reference

Consolidated OpenCitations Corpus – April 2017

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=19377475

3 references

30 April 2017

Consolidated OpenCitations Corpus – April 2017

170114