(Q30000777)

5

0 references

Emilia Huerta-Sánchez

3

0 references

Isabelle Dupanloup

2

0 references

Vitor Sousa

object named as

Vitor C Sousa

Creative Commons Attribution 4.0 International

4

0 references

language of work or name

English

0 references

publication date

October 2013

0 references

published in

PLOS Genetics

0 references

volume

9

0 references

issue

10

0 references

page(s)

e1003905

0 references

copyright license

start time

24 October 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Rate of de novo mutations and the importance of father's age to disease risk

21 May 2017

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SNP calling, genotype calling, and sample allele frequency estimation from New-Generation Sequencing data

21 May 2017

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Evolution and functional impact of rare coding variation from deep sequencing of human exomes

21 May 2017

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Resequencing data provide no evidence for a human bottleneck in Africa during the penultimate glacial period

21 May 2017

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Bayesian inference of ancient human demography from individual genome sequences

21 May 2017

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Genetic evidence for archaic admixture in Africa

21 May 2017

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Inference of human population history from individual whole-genome sequences

21 May 2017

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Hunter-gatherer genomic diversity suggests a southern African origin for modern humans

21 May 2017

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Genetic history of an archaic hominin group from Denisova Cave in Siberia

21 May 2017

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A map of human genome variation from population-scale sequencing

21 May 2017

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Sequencing of 50 human exomes reveals adaptation to high altitude

21 May 2017

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Characterizing the admixed African ancestry of African Americans

21 May 2017

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Isolation with migration models for more than two populations

21 May 2017

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Human genome sequencing using unchained base reads on self-assembling DNA nanoarrays

21 May 2017

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Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data

21 May 2017

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Approximate bayesian computation without summary statistics: the case of admixture

21 May 2017

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Statistical evaluation of alternative models of human evolution

21 May 2017

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Recent and ongoing selection in the human genome

21 May 2017

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A new approach to estimate parameters of speciation models with application to apes

21 May 2017

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Integration within the Felsenstein equation for improved Markov chain Monte Carlo methods in population genetics

21 May 2017

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21 May 2017

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Approximate Bayesian computation in population genetics

21 May 2017

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Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach

21 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Understanding the origin of species with genome-scale data: modelling gene flow

21 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Purifying selection causes widespread distortions of genealogical structure on the human X chromosome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Genealogy-based methods for inference of historical recombination and gene flow and their application in Saccharomyces cerevisiae

3 June 2018

1 reference

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The genetic prehistory of southern Africa

3 June 2018

1 reference

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Genomic variation in seven Khoe-San groups reveals adaptation and complex African history

3 June 2018

1 reference

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A novel approach for choosing summary statistics in approximate Bayesian computation

3 June 2018

1 reference

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Demographic inference using spectral methods on SNP data, with an analysis of the human out-of-Africa expansion

3 June 2018

1 reference

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Assessing the accuracy and power of population genetic inference from low-pass next-generation sequencing data

3 June 2018

1 reference

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Estimating demographic parameters from large-scale population genomic data using Approximate Bayesian Computation

3 June 2018

1 reference

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The joint allele frequency spectrum of multiple populations: a coalescent theory approach.

3 June 2018

1 reference

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An early divergence of KhoeSan ancestors from those of other modern humans is supported by an ABC-based analysis of autosomal resequencing data

3 June 2018

1 reference

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Demographic history and rare allele sharing among human populations

3 June 2018

1 reference

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Estimation of allele frequency and association mapping using next-generation sequencing data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Genotype and SNP calling from next-generation sequencing data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

fastsimcoal: a continuous-time coalescent simulator of genomic diversity under arbitrarily complex evolutionary scenarios

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Non-equilibrium allele frequency spectra via spectral methods

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Demographic history of Oceania inferred from genome-wide data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Ascertainment biases in SNP chips affect measures of population divergence

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Approximate Bayesian Computation (ABC) in practice.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Composite likelihood estimation of demographic parameters

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

ABC: a useful Bayesian tool for the analysis of population data.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Bayesian computation and model selection without likelihoods

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Efficient approximate Bayesian computation coupled with Markov chain Monte Carlo without likelihood.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Estimation of allele frequencies from high-coverage genome-sequencing projects

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Darwinian and demographic forces affecting human protein coding genes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Assessing the evolutionary impact of amino acid mutations in the human genome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Recombination rate estimation in the presence of hotspots

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Inference of population genetic parameters in metagenomics: a clean look at messy data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Genomic signatures of positive selection in humans and the limits of outlier approaches

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Model selection in ecology and evolution

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Genomic scans for selective sweeps using SNP data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Ascertainment bias in studies of human genome-wide polymorphism.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

A composite-likelihood approach for detecting directional selection from DNA sequence data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Bayesian analysis of an admixture model with mutations and arbitrarily linked markers

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Seeing ghosts: the effect of unsampled populations on migration rates estimated for sampled populations

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Maximum-likelihood estimation of demographic parameters using the frequency spectrum of unlinked single-nucleotide polymorphisms

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Reconstituting the frequency spectrum of ascertained single-nucleotide polymorphism data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Recent developments in genetic data analysis: what can they tell us about human demographic history?

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

The allele frequency spectrum in genome-wide human variation data reveals signals of differential demographic history in three large world populations

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Effect of unsampled populations on the estimation of population sizes and migration rates between sampled populations.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Estimation of population growth or decline in genetically monitored populations.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Usefulness of single nucleotide polymorphism data for estimating population parameters

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Estimation of population parameters and recombination rates from single nucleotide polymorphisms.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Nonequilibrium migration in human history

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Estimating ancestral population parameters.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3812088

Adaptive approximate Bayesian computation

3 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003905

Can one learn history from the allelic spectrum?

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003905

Patterns of DNA sequence diversity and genetic structure after a range expansion: lessons from the infinite-island model

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003905

A new look at the statistical model identification

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003905

Language Ecology and Linguistic Diversity on the African Continent

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003905

Bantu Expansions: Re-Envisioning a Central Problem of Early African History

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003905

Context dependence, ancestral misidentification, and spurious signatures of natural selection.

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003905

Revising the human mutation rate: implications for understanding human evolution

21 January 2018

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On optimal selection of summary statistics for approximate Bayesian computation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003905

Maximum likelihood estimation via the ECM algorithm: A general framework

21 January 2018

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21 January 2018

The UCSC Genome Browser

1 reference

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Jaatha: a fast composite-likelihood approach to estimate demographic parameters

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24204310

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PGEN.1003905

1 reference

1 reference

1 reference

PubMed publication ID

24204310

1 reference