(Q30010207)

21 May 2017

title

Ensemble modeling of protein disordered states: experimental restraint contributions and validation (English)

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21 May 2017

Joseph A Marsh

1

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Julie Forman-Kay

object named as

Julie D Forman-Kay

series ordinal

2

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language of work or name

English

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publication date

17 November 2011

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21 May 2017

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21 May 2017

volume

80

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21 May 2017

issue

2

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21 May 2017

page(s)

556-572

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Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm

21 May 2017

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Intrinsically disordered protein

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CFTR regulatory region interacts with NBD1 predominantly via multiple transient helices

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Biophysical characterization of intrinsically disordered proteins

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Atomic-level characterization of disordered protein ensembles

21 January 2018

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Constructing ensembles for intrinsically disordered proteins

21 January 2018

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Quantitative determination of the conformational properties of partially folded and intrinsically disordered proteins using NMR dipolar couplings

21 January 2018

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Determination of the free energy landscape of alpha-synuclein using spin label nuclear magnetic resonance measurements

21 January 2018

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Modeling the accessible conformations of the intrinsically unstructured transactivation domain of p53.

21 January 2018

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Refinement of ensembles describing unstructured proteins using NMR residual dipolar couplings.

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Ensemble calculations of unstructured proteins constrained by RDC and PRE data: a case study of urea-denatured ubiquitin

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21 January 2018

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21 January 2018

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21 January 2018

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Improved structural characterizations of the drkN SH3 domain unfolded state suggest a compact ensemble with native-like and non-native structure

21 January 2018

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Structure and disorder in an unfolded state under nondenaturing conditions from ensemble models consistent with a large number of experimental restraints

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21 January 2018

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Structural comparison of the unstable drkN SH3 domain and a stable mutant

21 January 2018

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Tryptophan solvent exposure in folded and unfolded states of an SH3 domain by 19F and 1H NMR.

21 January 2018

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Aromatic and methyl NOEs highlight hydrophobic clustering in the unfolded state of an SH3 domain

21 January 2018

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Distribution of molecular size within an unfolded state ensemble using small-angle X-ray scattering and pulse field gradient NMR techniques

21 January 2018

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Structural characterization of folded and unfolded states of an SH3 domain in equilibrium in aqueous buffer.

21 January 2018

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15N H/D-SOLEXSY experiment for accurate measurement of amide solvent exchange rates: application to denatured drkN SH3.

21 January 2018

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Multisite phosphorylation of a CDK inhibitor sets a threshold for the onset of DNA replication

21 January 2018

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Dynamic equilibrium engagement of a polyvalent ligand with a single-site receptor

21 January 2018

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Detailed structural characterization of unbound protein phosphatase 1 inhibitors

21 January 2018

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Sensitivity of secondary structure propensities to sequence differences between alpha- and gamma-synuclein: implications for fibrillation

21 January 2018

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Relationship between nuclear magnetic resonance chemical shift and protein secondary structure

21 January 2018

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Rapid and accurate calculation of protein 1H, 13C and 15N chemical shifts

21 January 2018

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Calculation of residual dipolar couplings from disordered state ensembles using local alignment.

21 January 2018

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Long-range interactions within a nonnative protein

21 January 2018

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Utilization of site-directed spin labeling and high-resolution heteronuclear nuclear magnetic resonance for global fold determination of large proteins with limited nuclear overhauser effect data

21 January 2018

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Paramagnetic relaxation enhancements in unfolded proteins: theory and application to drkN SH3 domain

21 January 2018

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NOE data demonstrating a compact unfolded state for an SH3 domain under non-denaturing conditions.

21 January 2018

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Calculation of hydrodynamic properties of globular proteins from their atomic-level structure

21 January 2018

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21 January 2018

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Knowledge-based protein secondary structure assignment

21 January 2018

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Contribution of long-range interactions to the secondary structure of an unfolded globin

21 January 2018

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Ultrafast signals in protein folding and the polypeptide contracted state

21 January 2018

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The burst phase in ribonuclease A folding and solvent dependence of the unfolded state.

21 January 2018

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Sequence determinants of compaction in intrinsically disordered proteins

21 January 2018

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Structural interpretation of paramagnetic relaxation enhancement-derived distances for disordered protein states

21 January 2018

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Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

21 January 2018

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Structural characterization of proteins with an attached ATCUN motif by paramagnetic relaxation enhancement NMR spectroscopy.

21 January 2018

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Mapping Long-Range Interactions in α-Synuclein using Spin-Label NMR and Ensemble Molecular Dynamics Simulations

21 January 2018

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Characterization of the residual structure in the unfolded state of the Δ131Δ fragment of staphylococcal nuclease

21 January 2018

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21 January 2018

Identifiers

DOI

10.1002/PROT.23220

1 reference

21 May 2017

1 reference