(Q30168664)

18 September 2017

A systematic study of the vibrational free energies of polypeptides in folded and random states (English)

1 reference

18 September 2017

3

R Nussinov

1 reference

18 September 2017

B Ma

1

1 reference

18 September 2017

C J Tsai

series ordinal

2

1 reference

18 September 2017

language of work or name

English

0 references

publication date

1 November 2000

1 reference

18 September 2017

1 reference

18 September 2017

79

1 reference

18 September 2017

5

1 reference

18 September 2017

2739-2753

1 reference

Folding and binding cascades: dynamic landscapes and population shifts

18 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Redistribution and loss of side chain entropy upon formation of a calmodulin-peptide complex

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Folding and binding cascades: shifts in energy landscapes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Explicit and implicit water simulations of a beta-hairpin peptide

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Folding funnels, binding funnels, and protein function

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Matching theory and experiment in protein folding

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Is protein folding hierarchic? II. Folding intermediates and transition states

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Is protein folding hierarchic? I. Local structure and peptide folding

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Insights into the mechanism of heterodimerization from the 1H-NMR solution structure of the c-Myc-Max heterodimeric leucine zipper

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

"New view" of protein folding reconciled with the old through multiple unfolding simulations.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Theory of protein folding: the energy landscape perspective

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Hydrophobic folding units derived from dissimilar monomer structures and their interactions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

On the entropy of protein folding

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Novel methods for molecular dynamics simulations

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Foldons, protein structural modules, and exons

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Conformational analysis of peptides corresponding to beta-hairpins and a beta-sheet that represent the entire sequence of the alpha-spectrin SH3 domain.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Fast events in protein folding: helix melting and formation in a small peptide.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Protein conformational landscapes: energy minimization and clustering of a long molecular dynamics trajectory

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Thermodynamics of ubiquitin unfolding

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Thermodynamics of the temperature-induced unfolding of globular proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Solution conformation of leiurotoxin I (scyllatoxin) by 1H nuclear magnetic resonance. Resonance assignment and secondary structure

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Heat capacity and entropy changes in processes involving proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Structural changes and fluctuations of proteins. II. Analysis of the denaturation of globular proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

The 'dynamics' in the thermodynamics of binding

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

The effect of inhibitor binding on the structural stability and cooperativity of the HIV-1 protease.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

Predicting the structures of 18 peptides using Geocore

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

The contribution of vibrational entropy to molecular association. The dimerization of insulin.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301155

First-principles calculation of the folding free energy of a three-helix bundle protein

26 November 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976513-1

A reassessment of the molecular origin of cold denaturation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976513-1

Temperature-dependent beta-sheet formation in beta-amyloid Abeta(1-40) peptide in water: uncoupling beta-structure folding from aggregation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976513-1

Cold denaturation of ubiquitin

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976513-1

High thermal stability and cold-denaturation of an artificial polypeptide

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976513-1

Explicit and implicit water simulations of a ?-hairpin peptide

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976513-1

Increased protein backbone conformational entropy upon hydrophobic ligand binding

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976513-1

10.1016/S0006-3495(00)76513-1

7 January 2021

Identifiers

DOI

1 reference

18 September 2017

1 reference

18 September 2017

PubMed publication ID

11053147

1 reference