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Mining frequent patterns in protein structures: a study of protease families.
scientific article
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instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
1201446
retrieved
11 November 2017
title
Mining frequent patterns in protein structures: a study of protease families.
(English)
1 reference
stated in
Europe PubMed Central
PMCID
1201446
retrieved
11 November 2017
author
Ivet Bahar
series ordinal
2
object named as
Ivet Bahar
0 references
author name string
Shann-Ching Chen
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
1201446
retrieved
11 November 2017
language of work or name
English
0 references
publication date
1 August 2004
1 reference
stated in
Europe PubMed Central
PMCID
1201446
retrieved
11 November 2017
published in
Bioinformatics
1 reference
stated in
Europe PubMed Central
PMCID
1201446
retrieved
11 November 2017
volume
20 Suppl 1
1 reference
stated in
Europe PubMed Central
PMCID
1201446
retrieved
11 November 2017
page(s)
i77-85
1 reference
stated in
Europe PubMed Central
PMCID
1201446
retrieved
11 November 2017
cites work
Allosteric changes in protein structure computed by a simple mechanical model: hemoglobin T<-->R2 transition.
1 reference
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PubMed Central
reference URL
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3 June 2018
Annotation in three dimensions. PINTS: Patterns in Non-homologous Tertiary Structures
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reference URL
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3 June 2018
WebFEATURE: An interactive web tool for identifying and visualizing functional sites on macromolecular structures
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PubMed Central
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3 June 2018
A model for statistical significance of local similarities in structure.
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PubMed Central
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retrieved
3 June 2018
PDB-REPRDB: a database of representative protein chains from the Protein Data Bank (PDB) in 2003.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1201446
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3 June 2018
Dynamics of proteins in crystals: comparison of experiment with simple models
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PubMed Central
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3 June 2018
TRILOGY: Discovery of sequence-structure patterns across diverse proteins.
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PubMed Central
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3 June 2018
The Protein Data Bank
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PubMed Central
reference URL
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retrieved
3 June 2018
Prediction of local structure in proteins using a library of sequence-structure motifs
1 reference
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PubMed Central
reference URL
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3 June 2018
Detection of protein three-dimensional side-chain patterns: new examples of convergent evolution.
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PubMed Central
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3 June 2018
TESS: a geometric hashing algorithm for deriving 3D coordinate templates for searching structural databases. Application to enzyme active sites
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PubMed Central
reference URL
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3 June 2018
Direct evaluation of thermal fluctuations in proteins using a single-parameter harmonic potential.
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3 June 2018
Evolutionary families of peptidases
1 reference
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PubMed Central
reference URL
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3 June 2018
The ENZYME data bank
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3 June 2018
Characterizing the microenvironment surrounding protein sites
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1201446
retrieved
3 June 2018
Analysis of catalytic residues in enzyme active sites.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1201446
retrieved
26 November 2018
Collective motions in HIV-1 reverse transcriptase: examination of flexibility and enzyme function.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1201446
retrieved
26 November 2018
Identifiers
DOI
10.1093/BIOINFORMATICS/BTH912
1 reference
stated in
Europe PubMed Central
PMCID
1201446
retrieved
11 November 2017
DBLP publication ID
conf/ismb/ChenB04
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
PMCID
1201446
1 reference
stated in
Europe PubMed Central
PMCID
1201446
retrieved
11 November 2017
PubMed ID
15262784
1 reference
stated in
Europe PubMed Central
PMCID
1201446
retrieved
11 November 2017
ResearchGate publication ID
8446363
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