(Q30350477)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15808224%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

title

Protein structure elucidation from minimal NMR data: the CLOUDS approach (English)

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10 January 2020

1

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10 January 2020

author name string

Miguel Llinás

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15808224%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

language of work or name

English

0 references

publication date

1 January 2005

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15808224%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

published in

Methods in Enzymology

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15808224%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

volume

394

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15808224%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

page(s)

261-295

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The direct determination of protein structure by NMR without assignment.

10 January 2020

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The NOESY jigsaw: automated protein secondary structure and main-chain assignment from sparse, unassigned NMR data.

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GARANT-a general algorithm for resonance assignment of multidimensional nuclear magnetic resonance spectra

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7 January 2021

Direct structure determination using residual dipolar couplings: reaction-site conformation of methionine sulfoxide reductase in solution

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7 January 2021

Determination of a high-quality nuclear magnetic resonance solution structure of the bovine pancreatic trypsin inhibitor and comparison with three crystal structures

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7 January 2021

"Ensemble" iterative relaxation matrix approach: a new NMR refinement protocol applied to the solution structure of crambin

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7 January 2021

New optimization methods from physics and biology

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The second type II module from human matrix metalloproteinase 2: structure, function and dynamics

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Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

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Multi-conformational peptide dynamics derived from NMR data: A new search algorithm and its application to antamanide

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7 January 2021

Protein heteronuclear NMR assignments using mean-field simulated annealing.

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7 January 2021

Validation of Protein Structure from Anisotropic Carbonyl Chemical Shifts in a Dilute Liquid Crystalline Phase

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7 January 2021

Tools for the automated assignment of high-resolution three-dimensional protein NMR spectra based on pattern recognition techniques

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7 January 2021

SANE (Structure Assisted NOE Evaluation): an automated model-based approach for NOE assignment

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7 January 2021

Main-chain-directed strategy for the assignment of 1H NMR spectra of proteins.

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7 January 2021

Solution NMR structure and backbone dynamics of the major cold-shock protein (CspA) from Escherichia coli: evidence for conformational dynamics in the single-stranded RNA-binding site

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7 January 2021

CLOUDS, a protocol for deriving a molecular proton density via NMR.

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7 January 2021

Protein structure elucidation from NMR proton densities.

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7 January 2021

Sorting signals from protein NMR spectra: SPI, a Bayesian protocol for uncovering spin systems.

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7 January 2021

BACUS: A Bayesian protocol for the identification of protein NOESY spectra via unassigned spin systems

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7 January 2021

CAMRA: chemical shift based computer aided protein NMR assignments

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7 January 2021

Amino acid type determination in the sequential assignment procedure of uniformly 13C/15N-enriched proteins.

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7 January 2021

Sequence-specific NMR assignment of proteins by global fragment mapping with the program MAPPER.

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7 January 2021

Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA

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7 January 2021

MONTE: An automated Monte Carlo based approach to nuclear magnetic resonance assignment of proteins

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7 January 2021

Solution structure of a calmodulin-target peptide complex by multidimensional NMR

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7 January 2021

Assessment of quality of derived macromolecular structures

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7 January 2021

Solution structure of a 142-residue recombinant prion protein corresponding to the infectious fragment of the scrapie isoform

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7 January 2021

Accurate protein crystallography at ultra-high resolution: valence electron distribution in crambin

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7 January 2021

A solution for the best rotation to relate two sets of vectors

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7 January 2021

Optimization by Simulated Annealing

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7 January 2021

Protein three-dimensional structure determination and sequence-specific assignment of 13C and 15N-separated NOE data. A novel real-space ab initio approach

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7 January 2021

Interproton distance bounds from 2D NOE intensities: effect of experimental noise and peak integration errors.

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7 January 2021

Automated probabilistic method for assigning backbone resonances of (13C,15N)-labeled proteins.

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7 January 2021

A computer-based protocol for semiautomated assignments and 3D structure determination of proteins

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7 January 2021

Rapid protein fold determination using unassigned NMR data

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7 January 2021

Equation of State Calculations by Fast Computing Machines

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7 January 2021

ARP/wARP's model-building algorithms. I. The main chain

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7 January 2021

Automated analysis of NMR assignments and structures for proteins.

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7 January 2021

Automated assignment of simulated and experimental NOESY spectra of proteins by feedback filtering and self-correcting distance geometry

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7 January 2021

Automated combined assignment of NOESY spectra and three-dimensional protein structure determination

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7 January 2021

A calculation strategy for the structure determination of symmetric dimers by 1H NMR.

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7 January 2021

Calculation of protein structures with ambiguous distance restraints. Automated assignment of ambiguous NOE crosspeaks and disulphide connectivities.

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7 January 2021

Ambiguous NOEs and automated NOE assignment

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7 January 2021

Automated NOESY interpretation with ambiguous distance restraints: the refined NMR solution structure of the pleckstrin homology domain from beta-spectrin

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7 January 2021

Application of distance geometry to the proton assignment problem.

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7 January 2021

Solution structure of horse heart ferricytochrome c and detection of redox-related structural changes by high-resolution 1H NMR

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7 January 2021

A Mathematical Theory of Communication

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7 January 2021

Relaxation Processes in a System of Two Spins

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7 January 2021

Rapid classification of a protein fold family using a statistical analysis of dipolar couplings

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7 January 2021

Automated 2D NOESY assignment and structure calculation of Crambin(S22/I25) with the self-correcting distance geometry based NOAH/DIAMOD programs

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7 January 2021

NMR solution structure of the human prion protein

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7 January 2021

A hybrid-hybrid matrix method for 3D NOE-NOE data analysis

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7 January 2021

Automated analysis of protein NMR assignments using methods from artificial intelligence.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994010-X

7 January 2021

10.1016/S0076-6879(05)94010-X

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15808224%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

1 reference