(Q30350845)

20 June 2017

A new progressive-iterative algorithm for multiple structure alignment. (English)

1 reference

20 June 2017

Dmitry Lupyan

1

1 reference

20 June 2017

Alejandra Leo-Macias

series ordinal

2

1 reference

20 June 2017

Angel R Ortiz

series ordinal

3

1 reference

20 June 2017

language of work or name

English

0 references

publication date

7 June 2005

1 reference

20 June 2017

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20 June 2017

21

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20 June 2017

3255-3263

1 reference

20 June 2017

15

1 reference

Combining multiple structure and sequence alignments to improve sequence detection and alignment: application to the SH2 domains of Janus kinases

20 June 2017

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

SCOP database in 2004: refinements integrate structure and sequence family data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

A strategy for the rapid multiple alignment of protein sequences. Confidence levels from tertiary structure comparisons

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

The ASTRAL compendium for protein structure and sequence analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

The ASTRAL Compendium in 2004

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

Measurement of DNA mismatch repair activity in live cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

DaliLite workbench for protein structure comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

Dali/FSSP classification of three-dimensional protein folds

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

Touring protein fold space with Dali/FSSP

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

Alignment of 700 globin sequences: extent of amino acid substitution and its correlation with variation in volume

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

Enhanced genome annotation using structural profiles in the program 3D-PSSM

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

The crystal structure and amino acid sequence of dehaloperoxidase from Amphitrite ornata indicate common ancestry with globins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

Quality assessment of multiple alignment programs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

Automated multiple structure alignment and detection of a common substructural motif.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

MUSTA--a general, efficient, automated method for multiple structure alignment and detection of common motifs: application to proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

Definition of the tempo of sequence diversity across an alignment and automatic identification of sequence motifs: Application to protein homologous families and superfamilies

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

Analysis of conservation and substitutions of secondary structure elements within protein superfamilies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

HOMSTRAD: a database of protein structure alignments for homologous families

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

SCOP: a structural classification of proteins database for the investigation of sequences and structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

A general method applicable to the search for similarities in the amino acid sequence of two proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

Progressive combinatorial algorithm for multiple structural alignments: application to distantly related proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

SSAP: sequential structure alignment program for protein structure comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

MAMMOTH (matching molecular models obtained from theory): an automated method for model comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

Exploring structural homology of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

Multiple protein sequence alignment from tertiary structure comparison: assignment of global and residue confidence levels

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

A method for simultaneous alignment of multiple protein structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

Sequence, structure and energetic determinants of phosphopeptide selectivity of SH2 domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

MaxSub: an automated measure for the assessment of protein structure prediction quality.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

CAMPASS: a database of structurally aligned protein superfamilies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

Multiple protein structure alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

An integrated approach to the analysis and modeling of protein sequences and structures. III. A comparative study of sequence conservation in protein structural families using multiple structural alignments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTI527

10.1093/BIOINFORMATICS/BTI527

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/LupyanLO05

20 June 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference