(Q30368014)

13 October 2017

Microsecond molecular dynamics simulation shows effect of slow loop dynamics on backbone amide order parameters of proteins (English)

1 reference

molecular dynamics simulation

13 October 2017

0 references

author

Kresten Lindorff-Larsen

2

1 reference

13 October 2017

Huafeng Xu

8

0 references

Isaiah T Arkin

object named as

Isaiah T Arkin

6

0 references

Ron Ofer Dror

4

object named as

Ron O Dror

1 reference

13 October 2017

Paul Maragakis

1

1 reference

13 October 2017

Michael P Eastwood

3

1 reference

13 October 2017

John L Klepeis

5

1 reference

13 October 2017

Morten Ø Jensen

7

1 reference

13 October 2017

Nikola Trbovic

9

1 reference

13 October 2017

Richard A Friesner

10

1 reference

13 October 2017

Arthur G Palmer

11

1 reference

13 October 2017

David E Shaw

12

1 reference

13 October 2017

language of work or name

English

0 references

publication date

1 March 2008

1 reference

Journal of Physical Chemistry B

13 October 2017

1 reference

13 October 2017

112

1 reference

13 October 2017

19

1 reference

13 October 2017

6155-6158

1 reference

NMR Relaxation and Internal Dynamics of Ubiquitin from a 0.2 μs MD Simulation

13 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2805408

Comparison of multiple Amber force fields and development of improved protein backbone parameters

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2805408

Fast time scale dynamics of protein backbones: NMR relaxation methods, applications, and functional consequences

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2805408

New tools provide new insights in NMR studies of protein dynamics

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2805408

Molecular dynamics and protein function

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2805408

Simultaneous determination of protein structure and dynamics.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2805408

Importance of the CMAP correction to the CHARMM22 protein force field: dynamics of hen lysozyme

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2805408

Side-Chain Orientation and Hydrogen-Bonding Imprint Supra-τc Motion on the Protein Backbone of Ubiquitin

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2805408

Determination of protein structures consistent with NMR order parameters

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2805408

Calculation of NMR-relaxation parameters for flexible molecules from molecular dynamics simulations

26 November 2018

1 reference

12 December 2020

NMR characterization of the dynamics of biomacromolecules

1 reference

12 December 2020

Quantitative Molecular Ensemble Interpretation of NMR Dipolar Couplings without Restraints

1 reference

12 December 2020

Exploring multiple timescale motions in protein GB3 using accelerated molecular dynamics and NMR spectroscopy

1 reference

12 December 2020

Validation of Molecular Dynamics Simulations of Biomolecules Using NMR Spin Relaxation as Benchmarks: Application to the AMBER99SB Force Field.

1 reference

12 December 2020

Internal motion of proteins: nuclear magnetic resonance measurements and dynamic simulations

1 reference

12 December 2020

Identifiers

DOI

10.1021/JP077018H

1 reference

13 October 2017

1 reference

13 October 2017

PubMed publication ID

18311962

1 reference