(Q30378109)

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CSSI-PRO: a method for secondary structure type editing, assignment and estimation in proteins using linear combination of backbone chemical shifts.

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scholarly article

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Europe PubMed Central

PubMed publication ID

21 June 2017

CSSI-PRO: a method for secondary structure type editing, assignment and estimation in proteins using linear combination of backbone chemical shifts. (English)

1 reference

Europe PubMed Central

PubMed publication ID

21 June 2017

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author name string

Monalisa Swain

1

1 reference

Europe PubMed Central

PubMed publication ID

21 June 2017

Hanudatta S Atreya

2

1 reference

Europe PubMed Central

PubMed publication ID

21 June 2017

publication date

16 June 2009

1 reference

Europe PubMed Central

PubMed publication ID

21 June 2017

Journal of Biomolecular NMR

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Europe PubMed Central

PubMed publication ID

21 June 2017

44

1 reference

Europe PubMed Central

PubMed publication ID

21 June 2017

4

1 reference

Europe PubMed Central

PubMed publication ID

21 June 2017

185-194

1 reference

Europe PubMed Central

PubMed publication ID

21 June 2017

Using neural network predicted secondary structure information in automatic protein NMR assignment.

1 reference

https://api.crossref.org/works/10.1007%2FS10858-009-9327-X

21 January 2018

NMRPipe: a multidimensional spectral processing system based on UNIX pipes

1 reference

https://api.crossref.org/works/10.1007%2FS10858-009-9327-X

21 January 2018

Protein backbone angle restraints from searching a database for chemical shift and sequence homology

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

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Estimation of protein secondary structure content directly from NMR spectra using an improved empirical correlation with averaged chemical shift

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

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The program XEASY for computer-supported NMR spectral analysis of biological macromolecules

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

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Efficient production of isotopically labeled proteins by cell-free synthesis: a practical protocol.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

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An NMR approach to structural proteomics

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

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NMR assignment of M-crystallin: a novel Ca2+ binding protein of the betagamma-crystallin superfamily from Methanosarcina acetivorans

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rapid measurement of 3J(H N-H alpha) and 3J(N-H beta) coupling constants in polypeptides

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

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Probing structure and functional dynamics of (large) proteins with aromatic rings: L-GFT-TROSY (4,3)D HCCH NMR spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Resonance assignment of proteins with high shift degeneracy based on 5D spectral information encoded in G2FT NMR experiments

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

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Characterization of the three-dimensional solution structure of human profilin: 1H, 13C, and 15N NMR assignments and global folding pattern

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

J-GFT NMR for precise measurement of mutually correlated nuclear spin-spin couplings

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

K2D2: estimation of protein secondary structure from circular dichroism spectra.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

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Principles and applications of GFT projection NMR spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

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G-matrix Fourier transform NOESY-based protocol for high-quality protein structure determination.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

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Chemical shifts as a tool for structure determination

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein NMR spectroscopy in structural genomics

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

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inferred from PubMed ID database lookup

NMR screening and crystal quality of bacterially expressed prokaryotic and eukaryotic proteins in a structural genomics pipeline

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

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GFT NMR, a new approach to rapidly obtain precise high-dimensional NMR spectral information.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rapid NMR data collection

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Automated analysis of protein NMR assignments and structures

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A tracked approach for automated NMR assignments in proteins (TATAPRO).

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Unfolded proteins and protein folding studied by NMR.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Calibration of the angular dependence of the amide proton-C alpha proton coupling constants, 3JHN alpha, in a globular protein. Use of 3JHN alpha for identification of helical secondary structure

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Probability-based protein secondary structure identification using combined NMR chemical-shift data

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequence-dependent correction of random coil NMR chemical shifts

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chemical shifts in denatured proteins: resonance assignments for denatured ubiquitin and comparisons with other denatured proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

G-matrix Fourier transform NMR spectroscopy for complete protein resonance assignment

1 reference

https://pubmed.ncbi.nlm.nih.gov/19529884

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S10858-009-9327-X

1 reference

Europe PubMed Central

PubMed publication ID

21 June 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

21 June 2017

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