(Q30385679)

13 September 2017

Detection of distant evolutionary relationships between protein families using theory of sequence profile-profile comparison. (English)

1 reference

13 September 2017

Mindaugas Margelevicius

1

object named as

Mindaugas Margelevicius

0 references

Česlovas Venclovas

2

object named as

Ceslovas Venclovas

0 references

author name string

Mindaugas Margelevicius

1

1 reference

13 September 2017

Ceslovas Venclovas

2

1 reference

13 September 2017

17 February 2010

1 reference

13 September 2017

1 reference

13 September 2017

11

1 reference

13 September 2017

89

1 reference

Creative Commons Attribution 2.0 Generic

13 September 2017

start time

17 February 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

cites work

PROCAIN: protein profile comparison with assisting information.

1 reference

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Discrimination between distant homologs and structural analogs: lessons from manually constructed, reliable data sets

20 June 2018

1 reference

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A comprehensive system for evaluation of remote sequence similarity detection

20 June 2018

1 reference

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Statistical significance in biological sequence analysis.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

Protein structure comparison: implications for the nature of 'fold space', and structure and function prediction.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

Natural history of S-adenosylmethionine-binding proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

Progress over the first decade of CASP experiments.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

Protein homology detection by HMM-HMM comparison

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

Scoring function for automated assessment of protein structure template quality

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

Crystal structure of RumA, an iron-sulfur cluster containing E. coli ribosomal RNA 5-methyluridine methyltransferase

20 June 2018

1 reference

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The ASTRAL Compendium in 2004

20 June 2018

1 reference

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Processing and evaluation of predictions in CASP4

20 June 2018

1 reference

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Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

The estimation of statistical parameters for local alignment score distributions.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

MaxSub: an automated measure for the assessment of protein structure prediction quality.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

Comparison of sequence profiles. Strategies for structural predictions using sequence information

20 June 2018

1 reference

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

20 June 2018

1 reference

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Searching databases of conserved sequence regions by aligning protein multiple-alignments

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

Analysis of compositionally biased regions in sequence databases

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

Protein structure comparison by alignment of distance matrices

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

Comparative protein modelling by satisfaction of spatial restraints

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

Detection of conserved segments in proteins: iterative scanning of sequence databases with alignment blocks

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

SCOP: a structural classification of proteins database for the investigation of sequences and structures

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

Identification of common molecular subsequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

Amino acid substitution matrices from protein blocks

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

Accurate statistical model of comparison between multiple sequence alignments

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

COACH: profile-profile alignment of protein families using hidden Markov models

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

Within the twilight zone: a sensitive profile-profile comparison tool based on information theory.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2837030

COMPASS: a tool for comparison of multiple protein alignments with assessment of statistical significance

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20158924

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Position-based sequence weights

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20158924

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-11-89

1 reference

journals/bmcbi/MargeleviciusV10

13 September 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1031592042

0 references

Fatcat ID

release_nbdxqgkbjbgdlgokf46jmxpmwa

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/nbdxqgkbjbgdlgokf46jmxpmwa

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

13 September 2017

PubMed publication ID

20158924

1 reference