(Q30406461)

16 September 2017

1 reference

title

A comprehensive overview of computational protein disorder prediction methods (English)

1 reference

16 September 2017

computational biology

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2

Jesse Eickholt

1 reference

16 September 2017

Xin Deng

1

1 reference

PMCID

3633217

16 September 2017

Jianlin Cheng

series ordinal

3

1 reference

16 September 2017

26 August 2011

1 reference

16 September 2017

1 reference

16 September 2017

8

1 reference

16 September 2017

114-121

1 reference

16 September 2017

1

1 reference

The IntFOLD server: an integrated web resource for protein fold recognition, 3D model quality assessment, intrinsic disorder prediction, domain prediction and ligand binding site prediction

16 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Improved sequence-based prediction of disordered regions with multilayer fusion of multiple information sources

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

PreDisorder: ab initio sequence-based prediction of protein disordered regions.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Predicting continuous local structure and the effect of its substitution for secondary structure in fragment-free protein structure prediction

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Rapid model quality assessment for protein structure predictions using the comparison of multiple models without structural alignments.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Predicting intrinsic disorder in proteins: an overview

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

PrDOS: prediction of disordered protein regions from amino acid sequence

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

iPDA: integrated protein disorder analyzer

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Predicting mostly disordered proteins by using structure-unknown protein data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

DisProt: the Database of Disordered Proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

A practical overview of protein disorder prediction methods

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Spritz: a server for the prediction of intrinsically disordered regions in protein sequences using kernel machines.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Protein disorder prediction by condensed PSSM considering propensity for order or disorder

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Length-dependent prediction of protein intrinsic disorder.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

FoldIndex: a simple tool to predict whether a given protein sequence is intrinsically unfolded

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

RONN: the bio-basis function neural network technique applied to the detection of natively disordered regions in proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Intrinsically unstructured proteins and their functions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

The DISOPRED server for the prediction of protein disorder

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Prediction and Functional Analysis of Native Disorder in Proteins from the Three Kingdoms of Life

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Protein disorder prediction: implications for structural proteomics

20 June 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

20 June 2018

https://api.crossref.org/works/10.1039%2FC1MB05207A

NORSp: Predictions of long regions without regular secondary structure

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

GlobPlot: Exploring protein sequences for globularity and disorder

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Intrinsic disorder in cell-signaling and cancer-associated proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Intrinsically unstructured proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Intrinsic disorder and protein function

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Sequence complexity of disordered protein

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Non-globular domains in protein sequences: automated segmentation using complexity measures

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

The meaning and use of the area under a receiver operating characteristic (ROC) curve

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

POODLE-L: a two-level SVM prediction system for reliably predicting long disordered regions.

20 June 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05207A

The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05207A

Characterizing proteolytic cleavage site activity using bio-basis function neural networks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05207A

To be folded or to be unfolded?

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05207A

Prediction of disordered regions in proteins based on the meta approach.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05207A

Assessment of disorder predictions in CASP6.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05207A

Prediction of global and local model quality in CASP8 using the ModFOLD server.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05207A

The ModFOLD server for the quality assessment of protein structural models

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05207A

Critical assessment of methods of protein structure prediction - Round VIII.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

[Prediction of natively unfolded regions in protein chain]

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Evaluation of disorder predictions in CASP5

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3633217

Intrinsic disorder prediction from the analysis of multiple protein fold recognition models

26 November 2018

1 reference

12 December 2020

Sequence Data Analysis for Long Disordered Regions Prediction in the Calcineurin Family

1 reference

12 December 2020

Prediction of unfolded segments in a protein sequence based on amino acid composition

1 reference

12 December 2020

POODLE-S: web application for predicting protein disorder by using physicochemical features and reduced amino acid set of a position-specific scoring matrix

1 reference

12 December 2020

Predicting Protein Disorder for N-, C-, and Internal Regions

1 reference

12 December 2020

Identifiers

DOI

10.1039/C1MB05207A

1 reference

16 September 2017

1 reference

16 September 2017

1 reference

PMCID

3633217