(Q30475612)

18 September 2017

Genome-wide synteny through highly sensitive sequence alignment: Satsuma (English)

1 reference

18 September 2017

1 reference

4

0 references

Kerstin Lindblad-Toh

7

Kerstin Lindblad-Toh

0 references

Jessica Alföldi

5

Jessica Alföldi

0 references

Pamela Russell

Pamela Russell

2

0 references

Manfred Grabherr

1

Manfred G Grabherr

1 reference

18 September 2017

Miriah Meyer

3

1 reference

PMCID

2859124

18 September 2017

Federica Di Palma

6

1 reference

PMCID

2859124

18 September 2017

language of work or name

English

0 references

publication date

5 March 2010

1 reference

18 September 2017

7

1 reference

based on heuristic

inferred from page(s)

published in

Bioinformatics

1 reference

18 September 2017

26

1 reference

18 September 2017

9

1 reference

18 September 2017

1145-1151

1 reference

MizBee: a multiscale synteny browser

18 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

Local DNA topography correlates with functional noncoding regions of the human genome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

The Sorghum bicolor genome and the diversification of grasses

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

The whole alignment and nothing but the alignment: the problem of spurious alignment flanks.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

Sequence alignment by cross-correlation.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

Genome sequence, comparative analysis and haplotype structure of the domestic dog

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

PatternHunter II: highly sensitive and fast homology search

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

The Genomes of Oryza sativa: a history of duplications

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

Evolution's cauldron: duplication, deletion, and rearrangement in the mouse and human genomes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

Human-mouse alignments with BLASTZ

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

PatternHunter: faster and more sensitive homology search

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

BLAT—The BLAST-Like Alignment Tool

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

A greedy algorithm for aligning DNA sequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

Alignment of whole genomes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

Identification of common molecular subsequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

Rapid and sensitive protein similarity searches

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

Basic local alignment search tool

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

Searching protein sequence libraries: Comparison of the sensitivity and selectivity of the Smith-Waterman and FASTA algorithms

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

An algorithm for the machine calculation of complex Fourier series

20 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ102

Scoring pairwise genomic sequence alignments.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859124

10.1093/BIOINFORMATICS/BTQ102

26 November 2018

Identifiers

DOI

1 reference

journals/bioinformatics/GrabherrRMMAPL10

18 September 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

18 September 2017

1 reference

PMCID

2859124