(Q30476403)

13 September 2017

Using mechanical force to probe the mechanism of pausing and arrest during continuous elongation by Escherichia coli RNA polymerase (English)

1 reference

13 September 2017

1 reference

1

1 reference

13 September 2017

Carlos Bustamante

5

0 references

author name string

David Izhaky

series ordinal

2

1 reference

13 September 2017

Glenna R Woodcock

series ordinal

3

1 reference

13 September 2017

Gijs J L Wuite

series ordinal

4

1 reference

13 September 2017

language of work or name

English

0 references

publication date

22 August 2002

1 reference

Proceedings of the National Academy of Sciences of the United States of America

13 September 2017

1 reference

13 September 2017

99

1 reference

13 September 2017

18

1 reference

13 September 2017

11682-11687

1 reference

RNA polymerase clamps down

13 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

An integrated laser trap/flow control video microscope for the study of single biomolecules

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

A structural model of transcription elongation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

Pausing by bacterial RNA polymerase is mediated by mechanistically distinct classes of signals

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

Single-molecule study of transcriptional pausing and arrest by E. coli RNA polymerase

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

Nonequilibrium mechanism of transcription termination from observations of single RNA polymerase molecules

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

Escherichia coli RNA polymerase translocation is accompanied by periodic bending of the DNA

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

Transcription elongation: structural basis and mechanisms

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

Shifting RNA polymerase into overdrive

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

Basic mechanisms of transcript elongation and its regulation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

Transcriptional arrest: Escherichia coli RNA polymerase translocates backward, leaving the 3' end of the RNA intact and extruded

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

Protein-RNA interactions in the active center of transcription elongation complex

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

Tethered particle motion method for studying transcript elongation by a single RNA polymerase molecule

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

Discontinuous movements of DNA and RNA in RNA polymerase accompany formation of a paused transcription complex.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

Transcription by single molecules of RNA polymerase observed by light microscopy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

RNA chain elongation by Escherichia coli RNA polymerase. Factors affecting the stability of elongating ternary complexes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

Structural analysis of ternary complexes of Escherichia coli RNA polymerase. Deoxyribonuclease I footprinting of defined complexes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

The single-nucleotide addition cycle in transcription: a biophysical and biochemical perspective

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

New models for the mechanism of transcription elongation and its regulation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129329

Force and velocity measured for single molecules of RNA polymerase.

20 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142417799

The RNA-DNA hybrid maintains the register of transcription by preventing backtracking of RNA polymerase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142417799

RNA polymerase switches between inactivated and activated states By translocating back and forth along the DNA and the RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142417799

An integrated model of the transcription complex in elongation, termination, and editing

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142417799

Direct observation of DNA rotation during transcription by Escherichia coli RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142417799

Allosteric binding of nucleoside triphosphates to RNA polymerase regulates transcription elongation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142417799

Transcript cleavage factors from E. coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142417799

Decreased resistance to bacterial infection and granulocyte defects in IAP-deficient mice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142417799

Transcription processivity: protein-DNA interactions holding together the elongation complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142417799

Transcription against an applied force

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12193647

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Escherichia coli transcript cleavage factors GreA and GreB: functions and mechanisms of action

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12193647

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Multiple RNA polymerase conformations and GreA: control of the fidelity of transcription

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12193647

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.142417799

1 reference

13 September 2017

0 references

1 reference

13 September 2017

PubMed publication ID

12193647

1 reference