(Q30477638)

14 October 2017

Quantitative prediction of mouse class I MHC peptide binding affinity using support vector machine regression (SVR) models (English)

1 reference

14 October 2017

support vector machine

1 reference

Wen Liu

1

1 reference

14 October 2017

Xiangshan Meng

2

1 reference

14 October 2017

Qiqi Xu

3

1 reference

14 October 2017

Darren R Flower

4

1 reference

14 October 2017

Tongbin Li

5

1 reference

14 October 2017

31 March 2006

1 reference

14 October 2017

1 reference

14 October 2017

7

1 reference

14 October 2017

182

1 reference

describes a project that uses

14 October 2017

support vector machine

1 reference

based on heuristic

inferred from title

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2105-7-182

0 references

cites work

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Induction of mucosal and systemic immune responses against human carcinoembryonic antigen by an oral vaccine

20 June 2018

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Identification of murine CD8 T cell epitopes in codon-optimized SARS-associated coronavirus spike protein

20 June 2018

1 reference

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Characterization of homologous and heterologous rotavirus-specific T-cell responses in infant and adult mice.

20 June 2018

1 reference

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Development of a DNA vaccine targeting human papillomavirus type 16 oncoprotein E6.

20 June 2018

1 reference

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MHCPred: A server for quantitative prediction of peptide-MHC binding.

20 June 2018

1 reference

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Reliable prediction of T-cell epitopes using neural networks with novel sequence representations

20 June 2018

1 reference

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MHCBN: a comprehensive database of MHC binding and non-binding peptides

20 June 2018

1 reference

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Paraflagellar rod protein-specific CD8+ cytotoxic T lymphocytes target Trypanosoma cruzi-infected host cells

20 June 2018

1 reference

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Prediction of MHC class I binding peptides, using SVMHC

20 June 2018

1 reference

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Identification of Chlamydia pneumoniae-derived mouse CD8 epitopes

20 June 2018

1 reference

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Structure-based prediction of binding peptides to MHC class I molecules: application to a broad range of MHC alleles

20 June 2018

1 reference

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SYFPEITHI: database for MHC ligands and peptide motifs

20 June 2018

1 reference

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AAindex: Amino Acid Index Database.

20 June 2018

1 reference

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Scheme for ranking potential HLA-A2 binding peptides based on independent binding of individual peptide side-chains.

20 June 2018

1 reference

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Prediction of major histocompatibility complex binding regions of protein antigens by sequence pattern analysis

20 June 2018

1 reference

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Toward prediction of class II mouse major histocompatibility complex peptide binding affinity: in silico bioinformatic evaluation using partial least squares, a robust multivariate statistical technique.

20 June 2018

1 reference

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Benchmarking B cell epitope prediction: underperformance of existing methods

26 November 2018

1 reference

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New horizons in mouse immunoinformatics: reliable in silico prediction of mouse class I histocompatibility major complex peptide binding affinity.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513606

Support vector machines-based quantitative structure-property relationship for the prediction of heat capacity.

26 November 2018

1 reference

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Comparative study of QSAR/QSPR correlations using support vector machines, radial basis function neural networks, and multiple linear regression.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513606

Improved prediction of MHC class I and class II epitopes using a novel Gibbs sampling approach.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513606

SVM based method for predicting HLA-DRB1*0401 binding peptides in an antigen sequence.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513606

Prediction of the isoelectric point of an amino acid based on GA-PLS and SVMs.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513606

Practical selection of SVM parameters and noise estimation for SVM regression

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513606

Towards the in silico identification of class II restricted T-cell epitopes: a partial least squares iterative self-consistent algorithm for affinity prediction.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513606

Application of support vector machines for T-cell epitopes prediction.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513606

Additive method for the prediction of protein-peptide binding affinity. Application to the MHC class I molecule HLA-A*0201.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513606

Prediction of MHC class I binding peptides using profile motifs.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513606

Physicochemical explanation of peptide binding to HLA-A*0201 major histocompatibility complex: A three-dimensional quantitative structure-activity relationship study

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513606

Predicting peptides that bind to MHC molecules using supervised learning of hidden Markov models.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513606

Neural network-based prediction of candidate T-cell epitopes.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513606

Prediction of MHC class II-binding peptides using an evolutionary algorithm and artificial neural network.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513606

Transporter Associated with Antigen Processing Preselection of Peptides Binding to the MHC: A Bioinformatic Evaluation

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16579851

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Toward the Quantitative Prediction of T-Cell Epitopes: CoMFA and CoMSIA Studies of Peptides with Affinity for the Class I MHC Molecule HLA-A*0201

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16579851

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-7-182

1 reference

14 October 2017

journals/bmcbi/LiuMXFL06

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

14 October 2017

1 reference