(Q57021685)

English

Physicochemical explanation of peptide binding to HLA-A*0201 major histocompatibility complex: A three-dimensional quantitative structure-activity relationship study

scientific article published on 01 August 2002

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scholarly article

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10 November 2019

Physicochemical explanation of peptide binding to HLA-A*0201 major histocompatibility complex: a three-dimensional quantitative structure-activity relationship study (English)

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Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12112675%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

molecular biology

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structural biology

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quantitative structure-activity relationship

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based on heuristic

inferred from title

Irini Doytchinova

1

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10 November 2019

author name string

Darren R Flower

2

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10 November 2019

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publication date

1 August 2002

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10 November 2019

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10 November 2019

48

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10 November 2019

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10 November 2019

505-518

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10 November 2019

Structure of the human class I histocompatibility antigen, HLA-A2

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Refined structure of the human histocompatibility antigen HLA-A2 at 2.6 A resolution

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Allele-specific motifs revealed by sequencing of self-peptides eluted from MHC molecules

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

The antigenic identity of peptide-MHC complexes: a comparison of the conformations of five viral peptides presented by HLA-A2

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Prominent role of secondary anchor residues in peptide binding to HLA-A2.1 molecules

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

The three-dimensional structure of peptide-MHC complexes

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

The structural basis for the increased immunogenicity of two HIV-reverse transcriptase peptide variant/class I major histocompatibility complexes

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Peptide binding to MHC class I molecules: implications for antigenic peptide prediction

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Two complementary methods for predicting peptides binding major histocompatibility complex molecules.

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Prediction of binding to MHC class I molecules.

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Prediction of MHC class II-binding peptides using an evolutionary algorithm and artificial neural network.

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

A structure-based algorithm to predict potential binding peptides to MHC molecules with hydrophobic binding pockets

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Predicting binding affinities of protein ligands from three-dimensional models: application to peptide binding to class I major histocompatibility proteins.

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Water dynamics at the binding interface of four different HLA-A2-peptide complexes

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Comparative molecular similarity index analysis (CoMSIA) to study hydrogen-bonding properties and to score combinatorial libraries

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Comparative molecular field analysis (CoMFA). 1. Effect of shape on binding of steroids to carrier proteins.

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Toward the Quantitative Prediction of T-Cell Epitopes: CoMFA and CoMSIA Studies of Peptides with Affinity for the Class I MHC Molecule HLA-A*0201

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Restart procedures for the conjugate gradient method

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Development and use of quantum mechanical molecular models. 76. AM1: a new general purpose quantum mechanical molecular model

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Antimicrobial activity of MHC class I-restricted CD8+ T cells in human tuberculosis

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Human histocompatibility leukocyte antigen-binding supermotifs predict broadly cross-reactive cytotoxic T lymphocyte responses in patients with acute hepatitis

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Human infection with Trypanosoma cruzi induces parasite antigen-specific cytotoxic T lymphocyte responses

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Degenerate cytotoxic T cell epitopes from P. falciparum restricted by multiple HLA-A and HLA-B supertype alleles.

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Peptide binding to the most frequent HLA-A class I alleles measured by quantitative molecular binding assays

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Positioning of a peptide in the cleft of HLA-A2 by complementing amino acid changes

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Robust multivariate statistics and the prediction of protein secondary structure content.

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Peptide quantitative structure-activity relationships, a multivariate approach.

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

New chemical descriptors relevant for the design of biologically active peptides. A multivariate characterization of 87 amino acids.

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Data modelling with neural networks: advantages and limitations.

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Three-dimensional quantitative structure-activity relationship of melatonin receptor ligands: a comparative molecular field analysis study.

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

3D-QSAR CoMFA on cyclin-dependent kinase inhibitors

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Enhanced in vitro potency and in vivo immunogenicity of a CTL epitope from hepatitis C virus core protein following amino acid replacement at secondary HLA-A2.1 binding positions

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Nonapeptide analogues containing (R)-3-hydroxybutanoate and beta-homoalanine oligomers: synthesis and binding affinity to a class I major histocompatibility complex protein.

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

The foreign antigen binding site and T cell recognition regions of class I histocompatibility antigens

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10154

21 January 2018

Identifiers

10.1002/PROT.10154

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12112675%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12112675%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

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