(Q47626649)

4 February 2018

title

A structure-based algorithm to predict potential binding peptides to MHC molecules with hydrophobic binding pockets. (English)

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4 February 2018

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2

Sette A

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4 February 2018

author name string

Altuvia Y

1

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4 February 2018

Sidney J

3

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4 February 2018

Southwood S

4

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4 February 2018

Margalit H

5

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4 February 2018

publication date

1 November 1997

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4 February 2018

published in

Human Immunology

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4 February 2018

volume

58

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4 February 2018

issue

1

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4 February 2018

page(s)

1-11

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4 February 2018

Antigen recognition by class I-restricted T lymphocytes

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Determinant selection of major histocompatibility complex class I-restricted antigenic peptides is explained by class I-peptide affinity and is strongly influenced by nondominant anchor residues

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Peptide selection by class I molecules of the major histocompatibility complex.

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Structure of peptides associated with class I and class II MHC molecules

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Antigenic peptide binding by class I and class II histocompatibility proteins

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The three-dimensional structure of peptide-MHC complexes

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MHC ligands and peptide motifs: first listing

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Precise prediction of a dominant class I MHC-restricted epitope of Listeria monocytogenes

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Two novel T cell epitope prediction algorithms based on MHC-binding motifs; comparison of predicted and published epitopes from Mycobacterium tuberculosis and HIV protein sequences.

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Dissection of major histocompatibility complex (MHC) and T cell receptor contact residues in a Kb-restricted ovalbumin peptide and an assessment of the predictive power of MHC-binding motifs

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Prominent role of secondary anchor residues in peptide binding to HLA-A2.1 molecules

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Db-binding peptides from influenza virus: effect of non-anchor residues on stability and immunodominance

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Precise prediction of major histocompatibility complex class II-peptide interaction based on peptide side chain scanning

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A computer program for predicting possible cytotoxic T lymphocyte epitopes based on HLA class I peptide-binding motifs

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Potential energy functions for threading

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The antigenic identity of peptide-MHC complexes: a comparison of the conformations of five viral peptides presented by HLA-A2

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7 January 2021

Ranking potential binding peptides to MHC molecules by a computational threading approach

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7 January 2021

Residue-residue potentials with a favorable contact pair term and an unfavorable high packing density term, for simulation and threading.

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The three-dimensional structure of HLA-B27 at 2.1 A resolution suggests a general mechanism for tight peptide binding to MHC

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Are proteins ideal mixtures of amino acids? Analysis of energy parameter sets

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Crystal structures of two viral peptides in complex with murine MHC class I H-2Kb

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Crystal structure of an H-2Kb-ovalbumin peptide complex reveals the interplay of primary and secondary anchor positions in the major histocompatibility complex binding groove

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Two tyrosinase nonapeptides recognized on HLA-A2 melanomas by autologous cytolytic T lymphocytes

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7 January 2021

Cytotoxic T lymphocytes recognize a fragment of influenza virus matrix protein in association with HLA-A2.

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Long-term culture and fine specificity of human cytotoxic T-lymphocyte clones reactive with human immunodeficiency virus type 1.

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An optimal viral peptide recognized by CD8+ T cells binds very tightly to the restricting class I major histocompatibility complex protein on intact cells but not to the purified class I protein

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7 January 2021

Comparison of cytotoxic T lymphocyte responses induced by peptide or DNA immunization: implications on immunogenicity and immunodominance

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7 January 2021

Recognition of influenza A matrix protein by HLA-A2-restricted cytotoxic T lymphocytes. Use of analogues to orientate the matrix peptide in the HLA-A2 binding site

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7 January 2021

Isolation of an endogenously processed immunodominant viral peptide from the class I H–2Kb molecule

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7 January 2021

Induction of ovalbumin-specific cytotoxic T cells by in vivo peptide immunization

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7 January 2021

Epitope specificity of H-2Kb-restricted, HSV-1-, and HSV-2-cross-reactive cytotoxic T lymphocyte clones

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7 January 2021

An immunodominant cytotoxic T cell epitope on the VP7 rotavirus protein overlaps the H2 signal peptide

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https://api.crossref.org/works/10.1016%2FS0198-8859%2897%2900210-3

7 January 2021

Identification of cytotoxic T cell epitopes on the VP3 and VP6 rotavirus proteins

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7 January 2021

Peptide selection by MHC class I molecules

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7 January 2021

Protection against lethal Sendai virus infection by in vivo priming of virus-specific cytotoxic T lymphocytes with a free synthetic peptide

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7 January 2021

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Identifiers

DOI

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4 February 2018

PubMed ID

9438204

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4 February 2018