(Q30479058)

11 November 2017

Use of plasmon coupling to reveal the dynamics of DNA bending and cleavage by single EcoRV restriction enzymes (English)

1 reference

11 November 2017

4

1 reference

22 June 2017

Björn M Reinhard

1

1 reference

11 November 2017

Sassan Sheikholeslami

series ordinal

2

1 reference

11 November 2017

Alexander Mastroianni

series ordinal

3

1 reference

11 November 2017

Jan Liphardt

series ordinal

5

1 reference

11 November 2017

language of work or name

English

0 references

publication date

16 February 2007

1 reference

11 November 2017

6

1 reference

Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

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11 November 2017

104

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11 November 2017

8

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11 November 2017

2667-2672

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The fluorescent toolbox for assessing protein location and function

11 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

DNA-tension dependence of restriction enzyme activity reveals mechanochemical properties of the reaction pathway

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Kinesin and dynein move a peroxisome in vivo: a tug-of-war or coordinated movement?

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Structural insights into the activity of enhancer-binding proteins.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Mechanically driven ATP synthesis by F1-ATPase

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Kinesin walks hand-over-hand

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Simultaneous DNA binding and bending by EcoRV endonuclease observed by real-time fluorescence

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Ethylene glycol monolayer protected nanoparticles for eliminating nonspecific binding with biological molecules

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Single-molecule detection of DNA hybridization

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Ten years of tension: single-molecule DNA mechanics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Type II restriction endonucleases

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Correlating structural dynamics and function in single ribozyme molecules

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Binuclear Metallohydrolases

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

The bacteriophage straight phi29 portal motor can package DNA against a large internal force

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Force measurements on single molecular contacts through evanescent wave microscopy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Processive translocation and DNA unwinding by individual RecBCD enzyme molecules

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Measuring conformational dynamics of biomolecules by single molecule fluorescence spectroscopy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Catalytic roles of divalent metal ions in phosphoryl transfer by EcoRV endonuclease

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Single-molecule enzymology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Fluorescence spectroscopy of single biomolecules.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Structure of the DNA-binding domains from NFAT, Fos and Jun bound specifically to DNA

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Conformational transitions and structural deformability of EcoRV endonuclease revealed by crystallographic analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Recognition and cleavage of DNA by type-II restriction endonucleases

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Probing the interaction between two single molecules: fluorescence resonance energy transfer between a single donor and a single acceptor.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

The crystal structure of EcoRV endonuclease and of its complexes with cognate and non-cognate DNA fragments

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Structure-function correlation for the EcoRV restriction enzyme: from non-specific binding to specific DNA cleavage

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Interaction of the restriction endonuclease EcoRV with the deoxyguanosine and deoxycytidine bases in its recognition sequence

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

DNA-bend modulation in a repressor-to-activator switching mechanism

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Rapid reaction analysis of the catalytic cycle of the EcoRV restriction endonuclease.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Structural basis for DNA bending by the architectural transcription factor LEF-1

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

DNA sequence determinants of CAP-induced bending and protein binding affinity.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1815239

Kinked-helices model of the nicotinic acetylcholine receptor ion channel and its complexes with blockers: simulation by the Monte Carlo minimization method

20 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0607826104

A molecular ruler based on plasmon coupling of single gold and silver nanoparticles.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0607826104

Selective colorimetric detection of polynucleotides based on the distance-dependent optical properties of gold nanoparticles.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0607826104

Calibration of dynamic molecular rulers based on plasmon coupling between gold nanoparticles

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0607826104

Optical Constants of the Noble Metals

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0607826104

Divalent metal ions at the active sites of the EcoRV and EcoRI restriction endonucleases.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0607826104

Decreased resistance to bacterial infection and granulocyte defects in IAP-deficient mice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0607826104

EcoRV restriction endonuclease binds all DNA sequences with equal affinity

21 January 2018

1 reference

12 December 2020

Photostability of dye molecules trapped in solid matrices

1 reference

12 December 2020

A hybridization model for the plasmon response of complex nanostructures

1 reference

12 December 2020

DNA recognition and nucleosome organization

1 reference

12 December 2020

Light-scattering submicroscopic particles as highly fluorescent analogs and their use as tracer labels in clinical and biological applications

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0607826104

1 reference

11 November 2017

0 references

1 reference

11 November 2017

1 reference