(Q30496531)

19 October 2017

RNA polymerase II trigger loop residues stabilize and position the incoming nucleotide triphosphate in transcription (English)

1 reference

19 October 2017

1

1 reference

19 October 2017

6

Michael Levitt

1 reference

19 October 2017

5

Roger D Kornberg

1 reference

19 October 2017

4

David A Bushnell

1 reference

19 October 2017

3

Dahlia R Weiss

1 reference

19 October 2017

Dong Wang

2

1 reference

PMC publication ID

2936645

19 October 2017

language of work or name

English

0 references

publication date

23 August 2010

1 reference

Proceedings of the National Academy of Sciences of the United States of America

19 October 2017

1 reference

19 October 2017

107

1 reference

19 October 2017

36

1 reference

19 October 2017

15745-15750

1 reference

GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

19 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

A movie of the RNA polymerase nucleotide addition cycle.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

Structural Basis of Transcription: Backtracked RNA Polymerase II at 3.4 Angstrom Resolution

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

Structural basis of transcription inhibition by alpha-amanitin and implications for RNA polymerase II translocation

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

The RNA polymerase II trigger loop functions in substrate selection and is directly targeted by alpha-amanitin

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

The molecular basis of eukaryotic transcription

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

Structural basis for substrate loading in bacterial RNA polymerase

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

Structural basis for transcription elongation by bacterial RNA polymerase

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

Structural perspective on mutations affecting the function of multisubunit RNA polymerases

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

The RNA polymerase II elongation complex

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

Transcription of eukaryotic protein-coding genes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

Canonical dynamics: Equilibrium phase-space distributions

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

Stimulation of transcription by mutations affecting conserved regions of RNA polymerase II.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

Protein serine/threonine phosphatases: structure, regulation, and functions in cell growth

14 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

14 July 2018

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

Accurate modeling of protein conformation by automatic segment matching

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936645

Role of the RNA polymerase trigger loop in catalysis and pausing.

14 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1009898107

Nucleic acid polymerases use a general acid for nucleotidyl transfer

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1009898107

Transcription arrest at an abasic site in the transcribed strand of template DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1009898107

Development of polyphosphate parameters for use with the AMBER force field.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1009898107

Comparison of simple potential functions for simulating liquid water

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1009898107

A Ratchet Mechanism of Transcription Elongation and Its Control

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1009898107

A central role of the RNA polymerase trigger loop in active-site rearrangement during transcriptional pausing

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20798057

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1009898107

1 reference

19 October 2017

0 references

1 reference

PMC publication ID

2936645

19 October 2017

PubMed publication ID

20798057

1 reference

PMC publication ID

2936645