(Q30512694)

English

Portal-large terminase interactions of the bacteriophage T4 DNA packaging machine implicate a molecular lever mechanism for coupling ATPase to DNA translocation

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scholarly article

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23 January 2020

Portal-large terminase interactions of the bacteriophage T4 DNA packaging machine implicate a molecular lever mechanism for coupling ATPase to DNA translocation (English)

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Europe PubMed Central

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23 January 2020

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Victor Padilla-Sanchez

2

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23 January 2020

4

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23 January 2020

author name string

Shylaja Hegde

1

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23 January 2020

Bonnie Draper

3

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23 January 2020

publication date

15 February 2012

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23 January 2020

Journal of Virology

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23 January 2020

86

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23 January 2020

8

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23 January 2020

4046-4057

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23 January 2020

describes a project that uses

1 reference

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3318623/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

Role of channel lysines and the "push through a one-way valve" mechanism of the viral DNA packaging motor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Structural basis for DNA recognition and loading into a viral packaging motor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Structure and function of the small terminase component of the DNA packaging machine in T4-like bacteriophages

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Three-dimensional structure of a viral genome-delivery portal vertex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Dynamics of the T4 bacteriophage DNA packasome motor: endonuclease VII resolvase release of arrested Y-DNA substrates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Crystallization of the nonameric small terminase subunit of bacteriophage P22

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Specificity of interactions among the DNA-packaging machine components of T4-related bacteriophages

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Regulation by interdomain communication of a headful packaging nuclease from bacteriophage T4.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Crystal structure of the DNA-recognition component of the bacterial virus Sf6 genome-packaging machine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Direct interaction of the bacteriophage SPP1 packaging ATPase with the portal protein.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Structure of the Small Outer Capsid Protein, Soc: A Clamp for Stabilizing Capsids of T4-like Phages

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

The small terminase, gp16, of bacteriophage T4 is a regulator of the DNA packaging motor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

The structure of the phage T4 DNA packaging motor suggests a mechanism dependent on electrostatic forces

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Assembly architecture and DNA binding of the bacteriophage P22 terminase small subunit

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

The bacteriophage DNA packaging motor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Single phage T4 DNA packaging motors exhibit large force generation, high velocity, and dynamic variability.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

The structure of the ATPase that powers DNA packaging into bacteriophage T4 procapsids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Structural framework for DNA translocation via the viral portal protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Experimental test of connector rotation during DNA packaging into bacteriophage phi29 capsids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

The functional domains of bacteriophage t4 terminase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Defining the ATPase center of bacteriophage T4 DNA packaging machine: requirement for a catalytic glutamate residue in the large terminase protein gp17.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Sequence analysis of bacteriophage T4 DNA packaging/terminase genes 16 and 17 reveals a common ATPase center in the large subunit of viral terminases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

The bacteriophage straight phi29 portal motor can package DNA against a large internal force

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Structure of the bacteriophage phi29 DNA packaging motor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

The green fluorescent protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Gene splicing by overlap extension: tailor-made genes using the polymerase chain reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Identification of a gene in Bacillus subtilis bacteriophage SPP1 determining the amount of packaged DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Bacteriophage P22 portal protein is part of the gauge that regulates packing density of intravirion DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Symmetry mismatch and DNA packaging in large bacteriophages

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

20 June 2018

Defining molecular and domain boundaries in the bacteriophage phi29 DNA packaging motor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

26 November 2018

The headful packaging nuclease of bacteriophage T4.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

26 November 2018

Portal fusion protein constraints on function in DNA packaging of bacteriophage T4.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

26 November 2018

Isolation and characterization of T4 bacteriophage gp17 terminase, a large subunit multimer with enhanced ATPase activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

26 November 2018

Analysis of capsid portal protein and terminase functional domains: interaction sites required for DNA packaging in bacteriophage T4

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318623

26 November 2018

Biochemical characterization of an ATPase activity associated with the large packaging subunit gp17 from bacteriophage T4

1 reference

https://pubmed.ncbi.nlm.nih.gov/22345478

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The terminase of bacteriophage lambda. Functional domains for cosB binding and multimer assembly

1 reference

https://pubmed.ncbi.nlm.nih.gov/22345478

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutational analysis of the prohead binding domain of the large subunit of terminase, the bacteriophage lambda DNA packaging enzyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/22345478

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural and functional domains of the large subunit of the bacteriophage T3 DNA packaging enzyme: importance of the C-terminal region in prohead binding

1 reference

https://pubmed.ncbi.nlm.nih.gov/22345478

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of the fine structure of the prohead binding domain of the packaging protein of bacteriophage T3 using a hexapeptide, an analog of a prohead binding site

1 reference

https://pubmed.ncbi.nlm.nih.gov/22345478

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional analysis of the DNA-packaging/terminase protein gp17 from bacteriophage T4

1 reference

https://pubmed.ncbi.nlm.nih.gov/22345478

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Structure of an Infectious P22 Virion Shows the Signal for Headful DNA Packaging

1 reference

https://pubmed.ncbi.nlm.nih.gov/22345478

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Modulation of the viral ATPase activity by the portal protein correlates with DNA packaging efficiency

1 reference

https://pubmed.ncbi.nlm.nih.gov/22345478

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mechanistic coupling of bacteriophage T4 DNA packaging to components of the replication-dependent late transcription machinery

1 reference

https://pubmed.ncbi.nlm.nih.gov/22345478

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The DNA translocating ATPase of bacteriophage T4 packaging motor

1 reference

https://pubmed.ncbi.nlm.nih.gov/22345478

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/JVI.07197-11

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22345478%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22345478%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22345478%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

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