(Q30527796)

English

Transcript profiling reveals complex auxin signalling pathway and transcription regulation involved in dedifferentiation and redifferentiation during somatic embryogenesis in cotton

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Transcript profiling reveals complex auxin signalling pathway and transcription regulation involved in dedifferentiation and redifferentiation during somatic embryogenesis in cotton (English)

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

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1 reference

based on heuristic

inferred from title

auxin-activated signaling pathway

1 reference

based on heuristic

inferred from title

3

object named as

Daojun Yuan

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

author name string

Xiyan Yang

1

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Xianlong Zhang

2

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Fangyan Jin

4

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Yunchao Zhang

5

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Jiao Xu

6

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

publication date

20 July 2012

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

BMC Plant Biology

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

12

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

110

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

https://scigraph.springernature.com/pub.10.1186/1471-2229-12-110

0 references

Auxin-regulated gene expression in intact soybean hypocotyl and excised hypocotyl sections

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20 June 2018

De novo characterization of a whitefly transcriptome and analysis of its gene expression during development.

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20 June 2018

Titration-free massively parallel pyrosequencing using trace amounts of starting material

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20 June 2018

MONOPTEROS controls embryonic root initiation by regulating a mobile transcription factor

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20 June 2018

Next-generation tag sequencing for cancer gene expression profiling

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

20 June 2018

Auxin-induced WUS expression is essential for embryonic stem cell renewal during somatic embryogenesis in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

20 June 2018

mRNA-Seq whole-transcriptome analysis of a single cell

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20 June 2018

Differential gene expression of cotton cultivar CCRI24 during somatic embryogenesis.

1 reference

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20 June 2018

LECs go crazy in embryo development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

20 June 2018

Expression profile analysis of genes involved in cell wall regeneration during protoplast culture in cotton by suppression subtractive hybridization and macroarray.

1 reference

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20 June 2018

Molecular regulation of somatic embryogenesis in potato: an auxin led perspective

1 reference

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20 June 2018

RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

1 reference

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20 June 2018

High-throughput functional annotation and data mining with the Blast2GO suite

1 reference

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20 June 2018

Arabidopsis embryogenesis

1 reference

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20 June 2018

The transcription factor MtSERF1 of the ERF subfamily identified by transcriptional profiling is required for somatic embryogenesis induced by auxin plus cytokinin in Medicago truncatula.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

20 June 2018

PlantTFDB: a comprehensive plant transcription factor database

1 reference

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20 June 2018

Embryonic patterning in Arabidopsis thaliana.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

20 June 2018

Identification and characterization of genes associated with the induction of embryogenic competence in leaf-protoplast-derived alfalfa cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

20 June 2018

Characterization of ZNF23, a KRAB-containing protein that is downregulated in human cancers and inhibits cell cycle progression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

20 June 2018

Coordinate gene expression during somatic embryogenesis in carrots

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

20 June 2018

The Arabidopsis F-box protein TIR1 is an auxin receptor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

20 June 2018

Efflux-dependent auxin gradients establish the apical-basal axis of Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

20 June 2018

Clustering of Microarray Data Reveals Transcript Patterns Associated with Somatic Embryogenesis in Soybean,

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

20 June 2018

Immuno-cytochemical localization of indole-3-acetic acid during induction of somatic embryogenesis in cultured sunflower embryos.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

20 June 2018

Auxin regulates SCF(TIR1)-dependent degradation of AUX/IAA proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

20 June 2018

Gene ontology: tool for the unification of biology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

20 June 2018

KEGG: kyoto encyclopedia of genes and genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

20 June 2018

Protein-protein interactions among the Aux/IAA proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

20 June 2018

Isolation of a carrot gene expressed specifically during early-stage somatic embryogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

20 June 2018

Histological analysis of direct somatic embryogenesis in Arabidopsis thaliana (L.) Heynh.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

Isolation and characterization of genes associated to cotton somatic embryogenesis by suppression subtractive hybridization and macroarray.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

Characterization of CsSEF1 gene encoding putative CCCH-type zinc finger protein expressed during cucumber somatic embryogenesis.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

GhHmgB3 deficiency deregulates proliferation and differentiation of cells during somatic embryogenesis in cotton.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

Genome-wide analysis reveals gene expression and metabolic network dynamics during embryo development in Arabidopsis

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

Characterization of transcriptional complexity during berry development in Vitis vinifera using RNA-Seq.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

Toward sequencing cotton (Gossypium) genomes.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

Two phases of chromatin decondensation during dedifferentiation of plant cells: distinction between competence for cell fate switch and a commitment for S phase.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

Efficient regeneration from cotyledon protoplasts in Arabidopsis thaliana.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

Transcriptional regulation of ROS controls transition from proliferation to differentiation in the root.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

Leafy cotyledon genes are essential for induction of somatic embryogenesis of Arabidopsis

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

Ectopic expression of BABY BOOM triggers a conversion from vegetative to embryonic growth.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

Characterization of a WRKY transcription factor expressed in late torpedo-stage embryos of Solanum chacoense

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

Overexpression of PGA37/MYB118 and MYB115 promotes vegetative-to-embryonic transition in Arabidopsis.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

The Nitrilase ZmNIT2 converts indole-3-acetonitrile to indole-3-acetic acid

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

DFL1, an auxin-responsive GH3 gene homologue, negatively regulates shoot cell elongation and lateral root formation, and positively regulates the light response of hypocotyl length.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

ydk1-D, an auxin-responsive GH3 mutant that is involved in hypocotyl and root elongation.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

Characterization of an Arabidopsis enzyme family that conjugates amino acids to indole-3-acetic acid

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

Structure-function analysis of the presumptive Arabidopsis auxin permease AUX1

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

Arabidopsis auxin-resistance gene AXR1 encodes a protein related to ubiquitin-activating enzyme E1.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

Analysis of plant hormones in tobacco flowers by micellar electrokinetic capillary chromatography coupled with on-line large volume sample stacking

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-12-110

21 January 2018

Somatic embryogenesis and plant regeneration in cotton (Gossypium hirsutum L.).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

26 November 2018

High-frequency somatic embryo production and maturation into normal plants in cotton (Gossypium hirsutum) through metabolic stress

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

26 November 2018

The Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 gene is expressed in developing ovules and embryos and enhances embryogenic competence in culture.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483692

26 November 2018

Arabidopsis mutants resistant to the auxin effects of indole-3-acetonitrile are defective in the nitrilase encoded by the NIT1 gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/22817809

12 December 2020

based on heuristic

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Tryptophan enhancement of somatic embryogenesis in rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/22817809

12 December 2020

based on heuristic

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DATF: a database of Arabidopsis transcription factors

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https://pubmed.ncbi.nlm.nih.gov/22817809

12 December 2020

based on heuristic

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PEI1, an embryo-specific zinc finger protein gene required for heart-stage embryo formation in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/22817809

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulation of indole-3-acetic Acid biosynthetic pathways in carrot cell cultures

1 reference

https://pubmed.ncbi.nlm.nih.gov/22817809

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Wounding Nicotiana tabacum Leaves Causes a Decline in Endogenous Indole-3-Acetic Acid

1 reference

https://pubmed.ncbi.nlm.nih.gov/22817809

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2229-12-110

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Dimensions Publication ID

0 references

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

ResearchGate publication ID

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