(Q30540348)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23695672%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

title

Direct imaging of single UvrD helicase dynamics on long single-stranded DNA (English)

1 reference

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1 March 2020

5

1 reference

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1 March 2020

4

Timothy M Lohman

1 reference

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1 March 2020

2

Hamza Balci

1 reference

1 March 2020

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23695672%20AND%20SRC:MED&resulttype=core&format=json

Kyung Suk Lee

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23695672%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

Haifeng Jia

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23695672%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

language of work or name

English

0 references

publication date

1 January 2013

1 reference

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1 March 2020

published in

Nature Communications

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23695672%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

volume

4

1 reference

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1 March 2020

page(s)

1878

1 reference

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Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported

1 March 2020

copyright license

start time

21 May 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Single-molecule imaging of the oligomer formation of the nonhexameric Escherichia coli UvrD helicase

1 reference

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Direct imaging of RecA nucleation and growth on single molecules of SSB-coated ssDNA

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Single-stranded DNA curtains for real-time single-molecule visualization of protein-nucleic acid interactions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Elastic coupling between RNA degradation and unwinding by an exoribonuclease

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Single-molecule views of protein movement on single-stranded DNA.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Single-stranded DNA translocation of E. coli UvrD monomer is tightly coupled to ATP hydrolysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Single-base pair unwinding and asynchronous RNA release by the hepatitis C virus NS3 helicase

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Rotations of the 2B Sub-domain of E. coli UvrD Helicase/Translocase Coupled to Nucleotide and DNA Binding

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Ultrahigh-resolution optical trap with single-fluorophore sensitivity

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Single-molecule analysis reveals the kinetics and physiological relevance of MutL-ssDNA binding

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

5'-Single-stranded/duplex DNA junctions are loading sites for E. coli UvrD translocase

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

PcrA helicase dismantles RecA filaments by reeling in DNA in uniform steps

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Unraveling the structure of DNA during overstretching by using multicolor, single-molecule fluorescence imaging

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Single-molecule analysis reveals differential effect of ssDNA-binding proteins on DNA translocation by XPD helicase

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Counting RAD51 proteins disassembling from nucleoprotein filaments under tension.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Impediment of E. coli UvrD by DNA-destabilizing force reveals a strained-inchworm mechanism of DNA unwinding

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Visualizing one-dimensional diffusion of proteins along DNA.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Non-hexameric DNA helicases and translocases: mechanisms and regulation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Real-time observation of bacteriophage T4 gp41 helicase reveals an unwinding mechanism

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Fluorescence-force spectroscopy maps two-dimensional reaction landscape of the holliday junction

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Real-time assembly and disassembly of human RAD51 filaments on individual DNA molecules

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Spring-loaded mechanism of DNA unwinding by hepatitis C virus NS3 helicase

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Single-molecule analysis of 1D diffusion and transcription elongation of T7 RNA polymerase along individual stretched DNA molecules

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

A nonuniform stepping mechanism for E. coli UvrD monomer translocation along single-stranded DNA

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

UvrD helicase unwinds DNA one base pair at a time by a two-part power stroke

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Real-time observation of RecA filament dynamics with single monomer resolution.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Nanomechanical measurements of the sequence-dependent folding landscapes of single nucleic acid hairpins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

A base-excision DNA-repair protein finds intrahelical lesion bases by fast sliding in contact with DNA.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

RNA translocation and unwinding mechanism of HCV NS3 helicase and its coordination by ATP

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Simultaneous, coincident optical trapping and single-molecule fluorescence

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

UvrD helicase, unlike Rep helicase, dismantles RecA nucleoprotein filaments in Escherichia coli.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Mechanism of ATP-dependent translocation of E.coli UvrD monomers along single-stranded DNA.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Single-molecule assay reveals strand switching and enhanced processivity of UvrD

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Myosin V walks hand-over-hand: single fluorophore imaging with 1.5-nm localization

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Kinetic mechanism for formation of the active, dimeric UvrD helicase-DNA complex

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Self-association equilibria of Escherichia coli UvrD helicase studied by analytical ultracentrifugation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Single-molecule fluorescence resonance energy transfer

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Initiation of genetic recombination and recombination-dependent replication

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Single-molecule studies of the effect of template tension on T7 DNA polymerase activity.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

An oligomeric form of E. coli UvrD is required for optimal helicase activity

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Escherichia coli DNA helicase II is active as a monomer

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Kinetics of conformational fluctuations in DNA hairpin-loops

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

MutS and MutL activate DNA helicase II in a mismatch-dependent manner

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Ionic effects on the elasticity of single DNA molecules

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Imaging of single molecule diffusion

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Visualization of single molecules of RNA polymerase sliding along DNA.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Effect of DNA polymerase I and DNA helicase II on the turnover rate of UvrABC excision nuclease

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Genetics and enzymology of DNA replication in Escherichia coli

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674262

Repetitive shuttling of a motor protein on DNA.

20 June 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS2882

Nonlinear low-force elasticity of single-stranded DNA molecules.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS2882

Simultaneous observation of individual ATPase and mechanical events by a single myosin molecule during interaction with actin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS2882

A Dimer of Escherichia coli UvrD is the active form of the helicase in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS2882

Amplified on-chip fluorescence detection of DNA hybridization by surface-initiated enzymatic polymerization.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS2882

Kinetic measurement of the step size of DNA unwinding by Escherichia coli UvrD helicase

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS2882

Bacillus stearothermophilus PcrA monomer is a single-stranded DNA translocase but not a processive helicase in vitro.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS2882

Stretching single stranded DNA, a model polyelectrolyte

21 January 2018

1 reference

12 December 2020

Efficient production of single-stranded DNA as long as 2 kb for sequencing of PCR-amplified DNA

1 reference

12 December 2020

Imaging and nano-manipulation of single biomolecules

1 reference

12 December 2020

UvrD-dependent replication of rolling-circle plasmids in Escherichia coli

1 reference

12 December 2020

Identifiers

DOI

10.1038/NCOMMS2882

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23695672%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

1 March 2020

ADS bibcode

2013NatCo...4.1878L

0 references

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23695672%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

PubMed publication ID

23695672

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23695672%20AND%20SRC:MED&resulttype=core&format=json