(Q30562037)

12 August 2017

Implications of pyrosequencing error correction for biological data interpretation (English)

1 reference

12 August 2017

1 reference

James M Bradeen

3

0 references

Matthew G. Bakker

object named as

Matthew G Bakker

series ordinal

1

0 references

Linda Kinkel

series ordinal

4

object named as

Linda L Kinkel

1 reference

12 August 2017

Zheng J Tu

2

1 reference

PMC publication ID

3431371

12 August 2017

language of work or name

English

0 references

publication date

30 August 2012

1 reference

12 August 2017

1 reference

12 August 2017

7

1 reference

12 August 2017

8

1 reference

12 August 2017

e44357

1 reference

Creative Commons Attribution 4.0 International

12 August 2017

start time

30 August 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

UCHIME improves sensitivity and speed of chimera detection

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

Removing noise from pyrosequenced amplicons

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

QIIME allows analysis of high-throughput community sequencing data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

Rapid and specific method for evaluating Streptomyces competitive dynamics in complex soil communities

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

Defining the healthy"core microbiome" of oral microbial communities

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

Accurate determination of microbial diversity from 454 pyrosequencing data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

ESPRIT: estimating species richness using large collections of 16S rRNA pyrosequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

The Genome Sequencer FLX System--longer reads, more applications, straight forward bioinformatics and more complete data sets

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

A pyrosequencing-tailored nucleotide barcode design unveils opportunities for large-scale sample multiplexing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

Clustal W and Clustal X version 2.0

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

Accuracy and quality of massively parallel DNA pyrosequencing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

UniFrac: a new phylogenetic method for comparing microbial communities

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

Diversity and productivity in a long-term grassland experiment.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

Inhibition and facilitation of nucleic acid amplification

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

Pyrobayes: an improved base caller for SNP discovery in pyrosequences.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

Clearcut: a fast implementation of relaxed neighbor joining.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3431371

Insidious effects of sequencing errors on perceived diversity in molecular surveys

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22952965

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

PCR primers targeting the 16S rRNA gene for the specific detection of streptomycetes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22952965

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0044357

1 reference

12 August 2017

0 references

1 reference

PMC publication ID

3431371

12 August 2017

PubMed publication ID

22952965

1 reference

PMC publication ID

3431371