(Q30586831)

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HYPER: a hierarchical algorithm for automatic determination of protein dihedral-angle constraints and stereospecific C beta H2 resonance assignments from NMR data

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scholarly article

1 reference

Europe PubMed Central

25 June 2017

HYPER: a hierarchical algorithm for automatic determination of protein dihedral-angle constraints and stereospecific C beta H2 resonance assignments from NMR data (English)

1 reference

Europe PubMed Central

25 June 2017

1 reference

based on heuristic

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author name string

Tejero R

1

1 reference

Europe PubMed Central

25 June 2017

Monleon D

2

1 reference

Europe PubMed Central

25 June 2017

Celda B

3

1 reference

Europe PubMed Central

25 June 2017

Powers R

4

1 reference

Europe PubMed Central

25 June 2017

Montelione GT

5

1 reference

Europe PubMed Central

25 June 2017

publication date

1 November 1999

1 reference

Europe PubMed Central

25 June 2017

Journal of Biomolecular NMR

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Europe PubMed Central

25 June 2017

15

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Europe PubMed Central

25 June 2017

251-264

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Europe PubMed Central

25 June 2017

3

1 reference

Europe PubMed Central

25 June 2017

Direct measurement of angles between bond vectors in high-resolution NMR.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein backbone angle restraints from searching a database for chemical shift and sequence homology

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Torsion angle dynamics for NMR structure calculation with the new program DYANA

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Influence of the local amino acid sequence upon the zones of the torsional angles phi and psi adopted by residues in proteins.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Measurement of three-bond, 13C'-13C beta J couplings in human ubiquitin by a triple resonance, E. COSY-type NMR technique.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Improving the quality of NMR and crystallographic protein structures by means of a conformational database potential derived from structure databases

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Distributed torsion angle grid search in high dimensions: a systematic approach to NMR structure determination.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Stereospecific assignments of side-chain protons and characterization of torsion angles in Eglin c.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The use of 1JC alpha H alpha coupling constants as a probe for protein backbone conformation.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure determination of the Antp(C39 → S) homeodomain from nuclear magnetic resonance data in solution using a novel strategy for the structure calculation with the programs DIANA, CALIBA, HABAS and GLOMSA

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High-resolution solution NMR structure of the Z domain of staphylococcal protein A

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Precise vicinal coupling constants 3JHN alpha in proteins from nonlinear fits of J-modulated [15N,1H]-COSY experiments.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Determination of stereospecific assignments, torsion-angle constraints, and rotamer populations in proteins using the program AngleSearch

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Use of proton nuclear Overhauser effects for the determination of the conformations of amino acid residues in oligopeptides

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Calculation of protein conformations by proton-proton distance constraints. A new efficient algorithm

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Solution NMR structure and backbone dynamics of the major cold-shock protein (CspA) from Escherichia coli: evidence for conformational dynamics in the single-stranded RNA-binding site

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A Potential Involving Multiple Proton Chemical-Shift Restraints for Nonstereospecifically Assigned Methyl and Methylene Protons

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Solution NMR structure of the major cold shock protein (CspA) from Escherichia coli: identification of a binding epitope for DNA.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

[Principles of quantitative analysis of two-dimensional spectra of nuclear Overhauser effect in evaluation of protein and peptide conformation]

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Combined use of 13C chemical shift and 1H alpha-13C alpha heteronuclear NOE data in monitoring a protein NMR structure refinement

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of phosphate-free ribonuclease A refined at 1.26 .ANG

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The impact of direct refinement against 13C alpha and 13C beta chemical shifts on protein structure determination by NMR.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Measurement of HN-H alpha J couplings in calcium-free calmodulin using new 2D and 3D water-flip-back methods

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Stereospecific assignment of beta-methylene protons in larger proteins using 3D 15N-separated Hartmann-Hahn and 13C-separated rotating frame Overhauser spectroscopy.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequential resonance assignments in protein 1H nuclear magnetic resonance spectra. Computation of sterically allowed proton-proton distances and statistical analysis of proton-proton distances in single crystal protein conformations.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Polypeptide secondary structure determination by nuclear magnetic resonance observation of short proton-proton distances

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

1H-NMR stereospecific assignments by conformational data-base searches

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677828

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1023/A:1008331216581

1 reference

Europe PubMed Central

25 June 2017

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1 reference

Europe PubMed Central

25 June 2017

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