(Q30587409)

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Determination of the populations and structures of multiple conformers in an ensemble from NMR data: multiple-copy refinement of nucleic acid structures using floating weights

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scholarly article

1 reference

Europe PubMed Central

25 June 2017

Determination of the populations and structures of multiple conformers in an ensemble from NMR data: multiple-copy refinement of nucleic acid structures using floating weights (English)

1 reference

Europe PubMed Central

25 June 2017

author name string

Görler A

1

1 reference

Europe PubMed Central

25 June 2017

Ulyanov NB

2

1 reference

Europe PubMed Central

25 June 2017

James TL

3

1 reference

Europe PubMed Central

25 June 2017

publication date

1 February 2000

1 reference

Europe PubMed Central

25 June 2017

Journal of Biomolecular NMR

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Europe PubMed Central

25 June 2017

16

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Europe PubMed Central

25 June 2017

2

1 reference

Europe PubMed Central

25 June 2017

147-164

1 reference

Europe PubMed Central

25 June 2017

A re-examination of the crystal structure of A-DNA using fiber diffraction data

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Small structural ensembles for a 17-nucleotide mimic of the tRNA T psi C-loop via fitting dipolar relaxation rates with the quadratic programming algorithm.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Statistical analysis of DNA duplex structural features

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Probability assessment of conformational ensembles: sugar repuckering in a DNA duplex in solution

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Two-dimensional nuclear Overhauser effect: complete relaxation matrix analysis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Determining local conformational variations in DNA. Nuclear magnetic resonance structures of the DNA duplexes d(CGCCTAATCG) and d(CGTCACGCGC) generated using back-calculation of the nuclear Overhauser effect spectra, a distance geometry algorithm an

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure refinement with molecular dynamics and a Boltzmann-weighted ensemble.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Time-averaged nuclear Overhauser effect distance restraints applied to tendamistat

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Do NOE distances contain enough information to assess the relative populations of multi-conformer structures?

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Solution-state structure of a DNA dodecamer duplex containing a Cis-syn thymine cyclobutane dimer, the major UV photoproduct of DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Systematic study of nuclear Overhauser effects vis-à-vis local helical parameters, sugar puckers, and glycosidic torsions in B DNA: insensitivity of NOE to local transitions in B DNA oligonucleotides due to internal structural compensations

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Insights into the dynamic nature of DNA duplex structure via analysis of nuclear Overhauser effect intensities

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dynamic modelling of a helical peptide in solution using NMR data: multiple conformations and multi-spin effects

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NF-kappa B binding mechanism: a nuclear magnetic resonance and modeling study of a GGG --> CTC mutation

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure refinement using time-averaged J-coupling constant restraints.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Determination of sugar conformations by NMR in larger DNA duplexes using both dipolar and scalar data: application to d(CATGTGACGTCACATG)2.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conformational analysis of the deoxyribofuranose ring in DNA by means of sums of proton-proton coupling constants: a graphical method

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The dynamic NMR structure of the T psi C-loop: implications for the specificity of tRNA methylation.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conformational Variability of Solution Nucelar Magnetic Resonance Structures

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metropolis Monte Carlo calculations of DNA structure using internal coordinates and NMR distance restraints: an alternative method for generating a high-resolution solution structure.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Relax, a flexible program for the back calculation of NOESY spectra based on complete-relaxation-matrix formalism.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A potential gene target in HIV-1: rationale, selection of a conserved sequence, and determination of NMR distance and torsion angle constraints

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure and dynamics of a DNA.RNA hybrid duplex with a chiral phosphorothioate moiety: NMR and molecular dynamics with conventional and time-averaged restraints

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Static and statistical bending of DNA evaluated by Monte Carlo simulations

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nuclear magnetic resonance structure of d(GCATATGATAG). d(CTATCATATGC): a consensus sequence for promoters recognized by sigma K RNA polymerase

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conformational analysis of the sugar ring in nucleosides and nucleotides. New description using the concept of pseudorotation

1 reference

https://pubmed.ncbi.nlm.nih.gov/10723994

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1023/A:1008386726542

1 reference

Europe PubMed Central

25 June 2017

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1 reference

Europe PubMed Central

25 June 2017

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