(Q30617768)

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Exploiting the transcriptome of Euphrates Poplar, Populus euphratica (Salicaceae) to develop and characterize new EST-SSR markers and construct an EST-SSR database

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Exploiting the transcriptome of Euphrates Poplar, Populus euphratica (Salicaceae) to develop and characterize new EST-SSR markers and construct an EST-SSR database (English)

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Populus euphratica

object named as

Populus euphratica

1 reference

based on heuristic

inferred from title

object named as

Salicaceae

1 reference

based on heuristic

inferred from title

6

object named as

Rongling Wu

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

author name string

Fang K Du

1

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Fang Xu

2

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Hong Qu

3

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Sisi Feng

4

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Jijun Tang

5

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

language of work or name

0 references

publication date

11 April 2013

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

8

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

4

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

e61337

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

copyright license

Creative Commons CC0 License

11 April 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

Two highly validated SSR multiplexes (8-plex) for Euphrates' poplar, Populus euphratica (Salicaceae).

1 reference

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20 June 2018

GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update

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A second generation framework for the analysis of microsatellites in expressed sequence tags and the development of EST-SSR markers for a conifer, Cryptomeria japonica

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20 June 2018

Genetic differentiation and delimitation between ecologically diverged Populus euphratica and P. pruinosa

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Clonal structure and genetic diversity of three desert phreatophytes

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Current trends in microsatellite genotyping.

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MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

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Genome-scale transcriptome analysis of the desert poplar, Populus euphratica.

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20 June 2018

Exploiting EST databases for the development and characterization of EST-SSR markers in castor bean (Ricinus communis L.).

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20 June 2018

A fast and cost-effective approach to develop and map EST-SSR markers: oak as a case study.

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20 June 2018

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20 June 2018

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20 June 2018

CD-HIT Suite: a web server for clustering and comparing biological sequences

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20 June 2018

SSR Locator: Tool for Simple Sequence Repeat Discovery Integrated with Primer Design and PCR Simulation.

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Genome-wide analysis of microsatellite polymorphism in chicken circumventing the ascertainment bias

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A database of simple sequence repeats from cereal and legume expressed sequence tags mined in silico: survey and evaluation.

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CMD: a Cotton Microsatellite Database resource for Gossypium genomics

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Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

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Genic microsatellite markers in plants: features and applications

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Transcript identification and profiling during salt stress and recovery of Populus euphratica.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623821

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Transferable EST-SSR markers for the study of polymorphism and genetic diversity in bread wheat.

1 reference

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In silico analysis on frequency and distribution of microsatellites in ESTs of some cereal species.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623821

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Data mining for simple sequence repeats in expressed sequence tags from barley, maize, rice, sorghum and wheat

1 reference

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Strategies for microsatellite isolation: a review.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623821

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Computational and experimental characterization of physically clustered simple sequence repeats in plants

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623821

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Selection against frameshift mutations limits microsatellite expansion in coding DNA

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Primer3 on the WWW for general users and for biologist programmers

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Construction of libraries enriched for sequence repeats and jumping clones, and hybridization selection for region-specific markers

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Isolation of human simple repeat loci by hybridization selection.

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Hypervariabflity of simple sequences as a general source for polymorphic DNA markers

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1 reference

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based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0061337

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

2013PLoSO...861337D

0 references

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

ResearchGate publication ID

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