(Q30633154)

19 October 2017

Analysis of the transcriptional networks underpinning the activation of murine macrophages by inflammatory mediators (English)

1 reference

19 October 2017

6

Tom C Freeman

1 reference

19 October 2017

David A Hume

5

0 references

Amir Giladi

series ordinal

4

object named as

Ido Amit

1 reference

19 October 2017

Sobia Raza

1

1 reference

PMCID

4378362

19 October 2017

Mark W Barnett

series ordinal

2

1 reference

PMCID

4378362

19 October 2017

Zohar Barnett-Itzhaki

series ordinal

3

1 reference

19 October 2017

10 April 2014

1 reference

Journal of Leukocyte Biology

19 October 2017

1 reference

19 October 2017

96

1 reference

19 October 2017

2

1 reference

19 October 2017

167-183

1 reference

Creative Commons Attribution-NonCommercial 4.0 International

19 October 2017

start time

30 January 2023

1 reference

April 2023 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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A high-throughput chromatin immunoprecipitation approach reveals principles of dynamic gene regulation in mammals

14 July 2018

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Characterization of lipopolysaccharide-stimulated cytokine expression in macrophages and monocytes

14 July 2018

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Transcript dynamics of proinflammatory genes revealed by sequence analysis of subcellular RNA fractions

14 July 2018

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Conservation and divergence in Toll-like receptor 4-regulated gene expression in primary human versus mouse macrophages

14 July 2018

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Macrophage polarization and plasticity in health and disease

14 July 2018

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Pig bone marrow-derived macrophages resemble human macrophages in their response to bacterial lipopolysaccharide

14 July 2018

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Combined chromatin and expression analysis reveals specific regulatory mechanisms within cytokine genes in the macrophage early immune response

14 July 2018

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Mouse genomic variation and its effect on phenotypes and gene regulation

14 July 2018

1 reference

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Innate immunity to intracellular pathogens: macrophage receptors and responses to microbial entry

14 July 2018

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IRF5 promotes inflammatory macrophage polarization and TH1-TH17 responses

14 July 2018

1 reference

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Polymorphisms in the Hsp70 gene locus are genetically associated with systemic lupus erythematosus

14 July 2018

1 reference

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Fine mapping of Leishmania major susceptibility Locus lmr2 and evidence of a role for Fli1 in disease and wound healing

14 July 2018

1 reference

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Delineation of diverse macrophage activation programs in response to intracellular parasites and cytokines

14 July 2018

1 reference

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Dissecting interferon-induced transcriptional programs in human peripheral blood cells

14 July 2018

1 reference

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Functional clustering and lineage markers: insights into cellular differentiation and gene function from large-scale microarray studies of purified primary cell populations

14 July 2018

1 reference

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Transcriptional control of the inflammatory response

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

miR-147, a microRNA that is induced upon Toll-like receptor stimulation, regulates murine macrophage inflammatory responses.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Allele-specific DNA methylation in mouse strains is mainly determined by cis-acting sequences

14 July 2018

1 reference

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Control of inducible gene expression by signal-dependent transcriptional elongation

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

High-density genotyping of STAT4 reveals multiple haplotypic associations with systemic lupus erythematosus in different racial groups

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Exploring the full spectrum of macrophage activation

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Macrophages as APC and the dendritic cell myth

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Genome-wide survey and expression profiling of CCCH-zinc finger family reveals a functional module in macrophage activation

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Varying importance of soluble and membrane CD14 in endothelial detection of lipopolysaccharide

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

LPS/TLR4 signal transduction pathway

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Systems biology of transcription control in macrophages

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Construction, visualisation, and clustering of transcription networks from microarray expression data

14 July 2018

1 reference

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DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists

14 July 2018

1 reference

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Transcriptional regulatory networks in macrophages

14 July 2018

1 reference

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The family of five: TIR-domain-containing adaptors in Toll-like receptor signalling

14 July 2018

1 reference

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Identification of genes selectively regulated by IFNs in endothelial cells

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Type I interferon in systemic lupus erythematosus and other autoimmune diseases

14 July 2018

1 reference

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Signal integration between IFNgamma and TLR signalling pathways in macrophages

14 July 2018

1 reference

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Biochemical and functional characterization of three activated macrophage populations.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Transcriptional network dynamics in macrophage activation

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Systems biology approaches identify ATF3 as a negative regulator of Toll-like receptor 4.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Tollip regulates proinflammatory responses to interleukin-1 and lipopolysaccharide

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Role of strain differences on host resistance and the transcriptional response of macrophages to infection with Yersinia enterocolitica.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Negative regulation of Toll-like-receptor signaling by IRF-4.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

LPS regulates a set of genes in primary murine macrophages by antagonising CSF-1 action

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Negative regulation of toll-like receptor-mediated immune responses

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Statistical analysis of MPSS measurements: application to the study of LPS-activated macrophage gene expression

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

The chemokine system in diverse forms of macrophage activation and polarization

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Antimicrobial reactive oxygen and nitrogen species: concepts and controversies

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Fibrotic disease and the T(H)1/T(H)2 paradigm

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Isolation of an endotoxin-MD-2 complex that produces Toll-like receptor 4-dependent cell activation at picomolar concentrations

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Genetic control of the innate immune response

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Central role for type I interferons and Tyk2 in lipopolysaccharide-induced endotoxin shock

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Interferon and granulopoiesis signatures in systemic lupus erythematosus blood

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

The many faces of macrophage activation

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Alternative activation of macrophages

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Regulation of gene expression in mouse macrophages stimulated with bacterial CpG-DNA and lipopolysaccharide.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Stereotyped and specific gene expression programs in human innate immune responses to bacteria

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Colony-stimulating factor-1 suppresses responses to CpG DNA and expression of toll-like receptor 9 but enhances responses to lipopolysaccharide in murine macrophages

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Macrophages exposed continuously to lipopolysaccharide and other agonists that act via toll-like receptors exhibit a sustained and additive activation state

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

M-1/M-2 macrophages and the Th1/Th2 paradigm

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Regulation of the plasminogen activator inhibitor-2 (PAI-2) gene in murine macrophages. Demonstration of a novel pattern of responsiveness to bacterial endotoxin

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Identification of genes differentially regulated by interferon alpha, beta, or gamma using oligonucleotide arrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Resistance to endotoxin shock and reduced dissemination of gram-negative bacteria in CD14-deficient mice

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Functional role of type I and type II interferons in antiviral defense

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Several mechanisms can account for defective E alpha gene expression in different mouse haplotypes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Inbred and wild mice carry identical deletions in their E alpha MHC genes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Bacterial lipopolysaccharide and gamma interferon induce transcription of beta interferon mRNA and interferon secretion in murine macrophages

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Endogenous interferon specifically regulates Newcastle disease virus-induced cytokine gene expression in mouse macrophages

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Latent enhancers activated by stimulation in differentiated cells

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Using MCL to extract clusters from networks.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

CD28 proximal promoter polymorphisms in systemic lupus erythematosus susceptibility

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Meta-analysis of lineage-specific gene expression signatures in mouse leukocyte populations

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Altered expression of signalling lymphocyte activation molecule (SLAM) family receptors CS1 (CD319) and 2B4 (CD244) in patients with systemic lupus erythematosus

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Identification and characterization of enhancers controlling the inflammatory gene expression program in macrophages.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Mouse models of asthma: a comparison between C57BL/6 and BALB/c strains regarding bronchial responsiveness, inflammation, and cytokine production.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Contribution of interferon-beta to the murine macrophage response to the toll-like receptor 4 agonist, lipopolysaccharide

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Essential role of MAPK phosphatase-1 in the negative control of innate immune responses

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

Genetic susceptibility to experimental autoimmune uveitis involves more than a predisposition to generate a T helper-1-like or a T helper-2-like response

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4378362

TLR4-mediated survival of macrophages is MyD88 dependent and requires TNF-alpha autocrine signalling

25 November 2018

1 reference

12 December 2020

Natural cathepsin E deficiency in the immune system of C57BL/6J mice

1 reference

12 December 2020

Differential production of tumor necrosis factor, macrophage colony stimulating factor, and interleukin 1 by human alveolar macrophages

1 reference

12 December 2020

Assessing association of common variation in the C1Q gene cluster with systemic lupus erythematosus

1 reference

12 December 2020

Single nucleotide polymorphisms of CD244 gene predispose to renal and neuropsychiatric manifestations with systemic lupus erythematosus

1 reference

12 December 2020

IFN-α cannot substitute lack of IFN-γ responsiveness in cells of an IFN-γR1 deficient patient

1 reference

12 December 2020

Polimorphisms in Inflammasome Genes Are Involved in the Predisposition to Systemic Lupus Erythematosus

1 reference

12 December 2020

Identifiers

DOI

10.1189/JLB.6HI0313-169R

1 reference

19 October 2017

1 reference

19 October 2017

1 reference

PMCID

4378362