(Q30648439)

19 September 2017

Quantitative and multiplexed DNA methylation analysis using long-read single-molecule real-time bisulfite sequencing (SMRT-BS). (English)

1 reference

19 September 2017

0 references

2

Robert Sebra

1 reference

19 September 2017

6

Robert J Desnick

1 reference

19 September 2017

Yao Yang

1

1 reference

19 September 2017

Benjamin S Pullman

3

1 reference

19 September 2017

Wanqiong Qiao

4

1 reference

19 September 2017

Inga Peter

5

1 reference

19 September 2017

C Ronald Geyer

7

1 reference

19 September 2017

John F DeCoteau

8

1 reference

19 September 2017

Stuart A Scott

9

1 reference

19 September 2017

language of work or name

English

0 references

publication date

6 May 2015

1 reference

19 September 2017

1 reference

19 September 2017

16

1 reference

19 September 2017

350

1 reference

Creative Commons Attribution 4.0 International

19 September 2017

start time

6 May 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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1 reference

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Advances in the profiling of DNA modifications: cytosine methylation and beyond

20 June 2018

1 reference

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Advances in epigenome-wide association studies for common diseases

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Methodological aspects of whole-genome bisulfite sequencing analysis.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Assessment of RainDrop BS-seq as a method for large-scale, targeted bisulfite sequencing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Recommendations for the design and analysis of epigenome-wide association studies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Dynamic DNA methylation across diverse human cell lines and tissues

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

NGSUtils: a software suite for analyzing and manipulating next-generation sequencing datasets.

20 June 2018

1 reference

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Conventional and nanotechniques for DNA methylation profiling

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Fast gapped-read alignment with Bowtie 2

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

DNA methylome analysis using short bisulfite sequencing data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

IMA: an R package for high-throughput analysis of Illumina's 450K Infinium methylation data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

DNA methylation detection: bisulfite genomic sequencing analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Origins of the E. coli strain causing an outbreak of hemolytic-uremic syndrome in Germany

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Correction of PCR-bias in quantitative DNA methylation studies by means of cubic polynomial regression

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Preparation of reduced representation bisulfite sequencing libraries for genome-scale DNA methylation profiling

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

A novel approach identifies new differentially methylated regions (DMRs) associated with imprinted genes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Identification of methylated regions with peak search based on Poisson model from massively parallel methylated DNA immunoprecipitation-sequencing data.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Genome-scale DNA methylation analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Combined CYP2C9, VKORC1 and CYP4F2 frequencies among racial and ethnic groups

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

BISMA--fast and accurate bisulfite sequencing data analysis of individual clones from unique and repetitive sequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Direct detection of DNA methylation during single-molecule, real-time sequencing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Hypomethylation at multiple maternally methylated imprinted regions including PLAGL1 and GNAS loci in Beckwith-Wiedemann syndrome.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Real-time DNA sequencing from single polymerase molecules

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Ultradeep bisulfite sequencing analysis of DNA methylation patterns in multiple gene promoters by 454 sequencing.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

BiSearch: primer-design and search tool for PCR on bisulfite-treated genomes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Evaluation of a potential epigenetic biomarker by quantitative methyl-single nucleotide polymorphism analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Bisulfite genomic sequencing: systematic investigation of critical experimental parameters

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

DNA hypermethylation in tumorigenesis: epigenetics joins genetics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Detection and measurement of PCR bias in quantitative methylation analysis of bisulphite-treated DNA.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Reduced extension temperatures required for PCR amplification of extremely A+T-rich DNA.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Role for DNA methylation in genomic imprinting

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

CpG islands in vertebrate genomes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4422326

Oxidative bisulfite sequencing of 5-methylcytosine and 5-hydroxymethylcytosine

20 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS12864-015-1572-7

Identification and resolution of artifacts in bisulfite sequencing.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS12864-015-1572-7

Serial pyrosequencing for quantitative DNA methylation analysis

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25943404

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

DNA methylation analysis by pyrosequencing

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25943404

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Reactivation of an inactive human X chromosome: evidence for X inactivation by DNA methylation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25943404

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S12864-015-1572-7

1 reference

Dimensions Publication ID

19 September 2017

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/s12864-015-1572-7

1 reference

19 September 2017

PubMed publication ID

25943404

1 reference