(Q30678474)

16 October 2017

A genome-scale integration and analysis of Lactococcus lactis translation data (English)

1 reference

16 October 2017

Lactococcus lactis

1 reference

inferred from title

author

Vassily Hatzimanikatis

series ordinal

5

1 reference

16 October 2017

Julien Racle

1

0 references

Laurence Girbal

object named as

Laurence Girbal

series ordinal

3

0 references

Muriel Cocaign-Bousquet

series ordinal

4

object named as

Muriel Cocaign-Bousquet

1 reference

16 October 2017

Flora Picard

2

1 reference

16 October 2017

10 October 2013

1 reference

PLOS Computational Biology

16 October 2017

1 reference

16 October 2017

9

1 reference

16 October 2017

10

1 reference

16 October 2017

e1003240

1 reference

Creative Commons Attribution 4.0 International

16 October 2017

start time

10 October 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

The significance of translation regulation in the stress response.

1 reference

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Bacterial translational regulations: high diversity between all mRNAs and major role in gene expression

20 June 2018

1 reference

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Recognition of the 70S ribosome and polysome by the RNA degradosome in Escherichia coli.

20 June 2018

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Superresolution imaging of ribosomes and RNA polymerase in live Escherichia coli cells

20 June 2018

1 reference

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The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria

20 June 2018

1 reference

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Selective ribosome profiling reveals the cotranslational chaperone action of trigger factor in vivo

20 June 2018

1 reference

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Investigation of the adaptation of Lactococcus lactis to isoleucine starvation integrating dynamic transcriptome and proteome information

20 June 2018

1 reference

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RNase Y in Bacillus subtilis: a Natively disordered protein that is the functional equivalent of RNase E from Escherichia coli

20 June 2018

1 reference

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Polysome profiling of the malaria parasite Plasmodium falciparum

20 June 2018

1 reference

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Determinants of translation efficiency and accuracy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794899

A comprehensive, quantitative, and genome-wide model of translation

20 June 2018

1 reference

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An evolutionarily conserved mechanism for controlling the efficiency of protein translation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794899

Translation efficiency is determined by both codon bias and folding energy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794899

Transcriptome and proteome exploration to model translation efficiency and protein stability in Lactococcus lactis

20 June 2018

1 reference

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Ribosome and transcript copy numbers, polysome occupancy and enzyme dynamics in Arabidopsis.

20 June 2018

1 reference

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Co-translational mRNA decay in Saccharomyces cerevisiae

20 June 2018

1 reference

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Single-molecule approaches to stochastic gene expression

20 June 2018

1 reference

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Structure and complexity of a bacterial transcriptome.

20 June 2018

1 reference

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Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling

20 June 2018

1 reference

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Effects of codon distributions and tRNA competition on protein translation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794899

The RNA degradosome of Escherichia coli: an mRNA-degrading machine assembled on RNase E.

20 June 2018

1 reference

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A model for protein translation: polysome self-organization leads to maximum protein synthesis rates.

20 June 2018

1 reference

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Translation initiation and the fate of bacterial mRNAs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794899

An algorithmic framework for genome-wide modeling and analysis of translation networks

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794899

Dissecting eukaryotic translation and its control by ribosome density mapping

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794899

Initiation of protein synthesis in bacteria

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794899

Genome-wide analysis of mRNA translation profiles in Saccharomyces cerevisiae

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794899

The complete genome sequence of the lactic acid bacterium Lactococcus lactis ssp. lactis IL1403

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794899

Low-redundancy sequencing of the entire Lactococcus lactis IL1403 genome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794899

Mathematical modelling of translation of mRNA in eucaryotes; steady state, time-dependent processes and application to reticulocytes.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3794899

Insights into the relation between mRNA and protein expression patterns: I. Theoretical considerations.

20 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003240

Linear covariance models to examine the determinants of protein levels in Lactococcus lactis.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003240

Stochastic theory of protein synthesis and polysome: ribosome profile on a single mRNA transcript.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003240

A computational framework for the design of optimal protein synthesis

21 January 2018

1 reference

12 December 2020

Visualization of Bacterial Genes in Action

1 reference

12 December 2020

Role of mRNA stability during genome-wide adaptation of Lactococcus lactis to carbon starvation

1 reference

12 December 2020

Correlation between mRNA and protein abundance in Desulfovibrio vulgaris: a multiple regression to identify sources of variations

1 reference

12 December 2020

10.1371/JOURNAL.PCBI.1003240

Identifiers

DOI

1 reference

journals/ploscb/RaclePGCH13

16 October 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

PMC publication ID

3794899

16 October 2017

PubMed publication ID

24130467

1 reference

PMC publication ID

3794899