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PeaKDEck: a kernel density estimator-based peak calling program for DNaseI-seq data.
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scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
3998130
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24407222%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
title
PeaKDEck: a kernel density estimator-based peak calling program for DNaseI-seq data
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
3998130
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24407222%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
author
Michael T. McCarthy
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
3998130
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24407222%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
author name string
Christopher A O'Callaghan
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
3998130
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24407222%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
language of work or name
English
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publication date
8 January 2014
1 reference
stated in
Europe PubMed Central
PMC publication ID
3998130
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24407222%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
published in
Bioinformatics
1 reference
stated in
Europe PubMed Central
PMC publication ID
3998130
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24407222%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
volume
30
1 reference
stated in
Europe PubMed Central
PMC publication ID
3998130
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24407222%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
issue
9
1 reference
stated in
Europe PubMed Central
PMC publication ID
3998130
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24407222%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
page(s)
1302-1304
1 reference
stated in
Europe PubMed Central
PMC publication ID
3998130
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24407222%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
copyright license
Creative Commons Attribution 3.0 Unported
start time
2 October 2016
1 reference
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April 2023 Public Data File from Crossref
copyright status
copyrighted
0 references
cites work
Patterns of regulatory activity across diverse human cell types predict tissue identity, transcription factor binding, and long-range interactions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3998130
retrieved
14 July 2018
The accessible chromatin landscape of the human genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3998130
retrieved
14 July 2018
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3998130
retrieved
14 July 2018
Chromatin accessibility pre-determines glucocorticoid receptor binding patterns.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3998130
retrieved
14 July 2018
Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3998130
retrieved
14 July 2018
Global mapping of protein-DNA interactions in vivo by digital genomic footprinting
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3998130
retrieved
14 July 2018
Model-based analysis of ChIP-Seq (MACS)
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3998130
retrieved
14 July 2018
F-Seq: a feature density estimator for high-throughput sequence tags
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3998130
retrieved
14 July 2018
High-resolution mapping and characterization of open chromatin across the genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3998130
retrieved
14 July 2018
Remodeling the chromatin structure of a nucleosome array by transcription factor-targeted trans-displacement of histones.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3998130
retrieved
14 July 2018
The 5' ends of Drosophila heat shock genes in chromatin are hypersensitive to DNase I.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3998130
retrieved
25 November 2018
Identifiers
DOI
10.1093/BIOINFORMATICS/BTT774
1 reference
stated in
Europe PubMed Central
PMC publication ID
3998130
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24407222%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
DBLP publication ID
journals/bioinformatics/McCarthyO14
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
PMC publication ID
3998130
1 reference
stated in
Europe PubMed Central
PMC publication ID
3998130
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24407222%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
PubMed publication ID
24407222
1 reference
stated in
Europe PubMed Central
PMC publication ID
3998130
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24407222%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
ResearchGate publication ID
259651591
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