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PIPE-CLIP: a comprehensive online tool for CLIP-seq data analysis
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scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
4054095
retrieved
21 September 2017
title
PIPE-CLIP: a comprehensive online tool for CLIP-seq data analysis
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
4054095
retrieved
21 September 2017
main subject
data analysis
0 references
author
Jonghyun Yun
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
4054095
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24451213%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 June 2020
author name string
Beibei Chen
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
4054095
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24451213%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 June 2020
Min Soo Kim
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
4054095
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24451213%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 June 2020
Joshua T Mendell
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMC publication ID
4054095
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24451213%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 June 2020
Yang Xie
series ordinal
5
1 reference
stated in
Europe PubMed Central
PMC publication ID
4054095
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24451213%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 June 2020
publication date
22 January 2014
1 reference
stated in
Europe PubMed Central
PMC publication ID
4054095
retrieved
21 September 2017
published in
Genome Biology
1 reference
stated in
Europe PubMed Central
PMC publication ID
4054095
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24451213%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 June 2020
volume
15
1 reference
stated in
Europe PubMed Central
PMC publication ID
4054095
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24451213%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 June 2020
issue
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
4054095
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24451213%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 June 2020
page(s)
R18
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Europe PubMed Central
PMC publication ID
4054095
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24451213%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 June 2020
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PubMed Central
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A computational approach for identifying microRNA-target interactions using high-throughput CLIP and PAR-CLIP sequencing
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Mixture models and wavelet transforms reveal high confidence RNA-protein interaction sites in MOV10 PAR-CLIP data
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DGCR8 HITS-CLIP reveals novel functions for the Microprocessor
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RNA targets of wild-type and mutant FET family proteins
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HITS-CLIP: panoramic views of protein-RNA regulation in living cells
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PARalyzer: definition of RNA binding sites from PAR-CLIP short-read sequence data
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Mapping in vivo protein-RNA interactions at single-nucleotide resolution from HITS-CLIP data
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iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution
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PubMed Central
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20 June 2018
Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities
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Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP
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20 June 2018
Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps
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20 June 2018
HITS-CLIP yields genome-wide insights into brain alternative RNA processing
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054095
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20 June 2018
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20 June 2018
CLIP identifies Nova-regulated RNA networks in the brain
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Nova regulates GABA(A) receptor gamma2 alternative splicing via a distal downstream UCAU-rich intronic splicing enhancer
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The neuronal RNA-binding protein Nova-2 is implicated as the autoantigen targeted in POMA patients with dementia
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The neuronal RNA binding protein Nova-1 recognizes specific RNA targets in vitro and in vivo
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20 June 2018
Transcriptome-wide analysis of regulatory interactions of the RNA-binding protein HuR.
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Crossref
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retrieved
21 January 2018
Identifiers
DOI
10.1186/GB-2014-15-1-R18
1 reference
stated in
Europe PubMed Central
PMC publication ID
4054095
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24451213%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 June 2020
Dimensions Publication ID
1036882977
0 references
PMC publication ID
4054095
1 reference
stated in
Europe PubMed Central
PMC publication ID
4054095
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24451213%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 June 2020
PubMed publication ID
24451213
1 reference
stated in
Europe PubMed Central
PMC publication ID
4054095
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24451213%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 June 2020
ResearchGate publication ID
259876214
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