(Q30758512)

23 September 2017

Identification and handling of artifactual gene expression profiles emerging in microarray hybridization experiments (English)

1 reference

23 September 2017

Leonid Brodsky

1

1 reference

23 September 2017

Andrei Leontovich

series ordinal

2

1 reference

23 September 2017

Michael Shtutman

series ordinal

3

1 reference

23 September 2017

Elena Feinstein

series ordinal

4

1 reference

23 September 2017

language of work or name

English

0 references

publication date

3 March 2004

1 reference

23 September 2017

Nucleic Acids Research

1 reference

23 September 2017

32

1 reference

23 September 2017

4

1 reference

23 September 2017

e46

1 reference

Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data

23 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Testing for differentially expressed genes with microarray data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

SNOMAD (Standardization and NOrmalization of MicroArray Data): web-accessible gene expression data analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Cellular response to hypoxia involves signaling via Smad proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

A common reference for cDNA microarray hybridizations

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Quantitative noise analysis for gene expression microarray experiments

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Significance and statistical errors in the analysis of DNA microarray data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Ratio statistics of gene expression levels and applications to microarray data analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Low oxygen tension stimulates collagen synthesis and COL1A1 transcription through the action of TGF-beta1.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Multiclass cancer diagnosis using tumor gene expression signatures

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

A new approach for filtering noise from high-density oligonucleotide microarray datasets

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Issues in cDNA microarray analysis: quality filtering, channel normalization, models of variations and assessment of gene effects

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

The lymphochip: a specialized cDNA microarray for the genomic-scale analysis of gene expression in normal and malignant lymphocytes.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Kolmogorov-Smirnov statistic and its application in library design

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Importance of replication in microarray gene expression studies: statistical methods and evidence from repetitive cDNA hybridizations

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Biomedical discovery with DNA arrays

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Molecular classification of cancer: class discovery and class prediction by gene expression monitoring

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

DNA arrays for analysis of gene expression

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Exploring the new world of the genome with DNA microarrays

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Parallel human genome analysis: microarray-based expression monitoring of 1000 genes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

A clustering technique for summarizing multivariate data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Hypoxia upregulates the synthesis of TGF-beta 1 by human dermal fibroblasts

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Adaptive double self-organizing maps for clustering gene expression profiles

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Statistical design of reverse dye microarrays

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Gene expression informatics--it's all in your mine.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=390318

Hypoxia promotes fibrogenesis in human renal fibroblasts

25 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/14999086

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Calculation of the minimum number of replicate spots required for detection of significant gene expression fold change in microarray experiments

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/14999086

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Oxygen regulation of TGF-beta 1 mRNA in human hepatoma (Hep G2) cells

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/14999086

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GNH043

1 reference

23 September 2017

1 reference

23 September 2017

PubMed publication ID

14999086

1 reference