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Plant genomes enclose footprints of past infections by giant virus relatives
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Europe PubMed Central
PMC publication ID
4083422
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24969138%20AND%20SRC:MED&resulttype=core&format=json
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21 March 2020
title
Plant genomes enclose footprints of past infections by giant virus relatives
(English)
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21 March 2020
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giant virus
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Florian Maumus
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1
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4083422
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21 March 2020
Fabien Nogué
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3
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21 March 2020
Guillaume Blanc
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21 March 2020
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Aline Epert
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21 March 2020
language of work or name
English
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27 June 2014
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21 March 2020
published in
Nature Communications
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21 March 2020
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5
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21 March 2020
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21 March 2020
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Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International
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27 June 2014
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cites work
Population genomics supports baculoviruses as vectors of horizontal transfer of insect transposons
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Pandoraviruses: amoeba viruses with genomes up to 2.5 Mb reaching that of parasitic eukaryotes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Pan genome of the phytoplankton Emiliania underpins its global distribution.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Hidden evolutionary complexity of Nucleo-Cytoplasmic Large DNA viruses of eukaryotes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Distinct phytochrome actions in nonvascular plants revealed by targeted inactivation of phytobilin biosynthesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Virophages to viromes: a report from the frontier of viral oceanography
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Endogenous viruses: insights into viral evolution and impact on host biology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Fast gapped-read alignment with Bowtie 2
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Phytozome: a comparative platform for green plant genomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Paleovirology - ghosts and gifts of viruses past
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Lausannevirus, a giant amoebal virus encoding histone doublets
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
DNA viruses: the really big ones (giruses)
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Giant viruses: conflicts in revisiting the virus concept
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Origin and evolution of eukaryotic large nucleo-cytoplasmic DNA viruses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Genome-wide evolutionary analysis of eukaryotic DNA methylation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
BLAST-EXPLORER helps you building datasets for phylogenetic analysis.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Eukaryotic large nucleo-cytoplasmic DNA viruses: clusters of orthologous genes and reconstruction of viral genome evolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Giant Marseillevirus highlights the role of amoebae as a melting pot in emergence of chimeric microorganisms
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
RNA-mediated chromatin-based silencing in plants
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Physcomitrella patens DCL3 is required for 22-24 nt siRNA accumulation, suppression of retrotransposon-derived transcripts, and normal development
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Phylogenetic evidence for extensive lateral acquisition of cellular genes by Nucleocytoplasmic large DNA viruses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Coevolution of endogenous betaretroviruses of sheep and their host
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
The genome of the brown alga Ectocarpus siliculosus contains a series of viral DNA pieces, suggesting an ancient association with large dsDNA viruses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Linear plasmids in plant mitochondria: peaceful coexistences or malicious invasions?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Rates of evolutionary change in viruses: patterns and determinants
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Giant viruses, giant chimeras: the multiple evolutionary histories of Mimivirus genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Identification of two virus integration sites in the brown alga Feldmannia chromosome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Structure and function of archaeal RNA polymerases.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Pseudogenes in the ENCODE regions: consensus annotation, analysis of transcription, and evolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
PAML 4: phylogenetic analysis by maximum likelihood
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
The ancient Virus World and evolution of cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Evolutionary genomics of nucleo-cytoplasmic large DNA viruses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
The origin of viruses and their possible roles in major evolutionary transitions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Bayes empirical bayes inference of amino acid sites under positive selection
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
ProtTest: selection of best-fit models of protein evolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Chromatin-based silencing mechanisms
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Late viral interference induced by transdominant Gag of an endogenous retrovirus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
GeneWise and Genomewise
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Analyses of LTR-retrotransposon structures reveal recent and rapid genomic DNA loss in rice
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
MUSCLE: multiple sequence alignment with high accuracy and high throughput
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Common origin of four diverse families of large eukaryotic DNA viruses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
A Hypothesis for DNA Viruses as the Origin of Eukaryotic Replication Proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
EMBOSS: the European Molecular Biology Open Software Suite
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Syncytin is a captive retroviral envelope protein involved in human placental morphogenesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
The paleontology of intergene retrotransposons of maize
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
The complete DNA sequence of lymphocystis disease virus.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Evolutionary relationships among large double-stranded DNA viruses that infect microalgae and other organisms as inferred from DNA polymerase genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083422
retrieved
21 June 2018
Persistent virus integration into the genome of its algal host, Ectocarpus siliculosus (Phaeophyceae).
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNCOMMS5268
retrieved
21 January 2018
Genomic analysis of the smallest giant virus--Feldmannia sp. virus 158.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNCOMMS5268
retrieved
21 January 2018
I am what I eat and I eat what I am: acquisition of bacterial genes by giant viruses
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24969138
retrieved
12 December 2020
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Identifiers
DOI
10.1038/NCOMMS5268
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stated in
Europe PubMed Central
PMC publication ID
4083422
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24969138%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 March 2020
ADS bibcode
2014NatCo...5.4268M
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Dimensions Publication ID
1007811369
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PMC publication ID
4083422
1 reference
stated in
Europe PubMed Central
PMC publication ID
4083422
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24969138%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 March 2020
PubMed publication ID
24969138
1 reference
stated in
Europe PubMed Central
PMC publication ID
4083422
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24969138%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 March 2020
ResearchGate publication ID
263475610
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