(Q30843913)

17 November 2017

Cryo-EM image alignment based on nonuniform fast Fourier transform (English)

1 reference

cryogenic electron microscopy

17 November 2017

0 references

2

Pawel A Penczek

1 reference

17 November 2017

Zhengfan Yang

1

1 reference

17 November 2017

8 April 2008

1 reference

17 November 2017

1 reference

17 November 2017

108

1 reference

17 November 2017

9

1 reference

17 November 2017

959-969

1 reference

Structure of the ribosome-bound cricket paralysis virus IRES RNA.

17 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

SPARX, a new environment for Cryo-EM image processing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

FREALIGN: high-resolution refinement of single particle structures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

XMIPP: a new generation of an open-source image processing package for electron microscopy.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

2D fast rotational matching for image processing of biophysical data.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

Efficiency of 2D alignment methods

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

Single-particle electron cryo-microscopy: towards atomic resolution.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

Resampling of data between arbitrary grids using convolution interpolation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

The ribosome at improved resolution: new techniques for merging and orientation refinement in 3D cryo-electron microscopy of biological particles

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

Three-dimensional reconstruction from electron micrographs of disordered specimens. II. Implementation and results

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

Three-dimensional reconstruction from electron micrographs of disordered specimens. I. Method

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

Classification of macromolecular assemblies studied as 'single particles'.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

The gridding method for image reconstruction by Fourier transformation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

Fast rotational matching of single-particle images.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

Spline-based image-to-volume registration for three-dimensional electron microscopy.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

Unified 3-D structure and projection orientation refinement using quasi-Newton algorithm.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

Linear interpolation revitalized.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

A multiresolution approach to orientation assignment in 3D electron microscopy of single particles

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

Iterative tomographic image reconstruction using Fourier-based forward and back-projectors.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

Gridding-based direct Fourier inversion of the three-dimensional ray transform.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2585382

The correlation averaging of a regularly arranged bacterial cell envelope protein

25 November 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.ULTRAMIC.2008.03.006

A fast sinc function gridding algorithm for fourier inversion in computer tomography.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.ULTRAMIC.2008.03.006

Corrim-based alignment for improved speed in single-particle image processing

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.ULTRAMIC.2008.03.006

On search directions for minimization algorithms

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.ULTRAMIC.2008.03.006

Updating quasi-Newton matrices with limited storage

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.ULTRAMIC.2008.03.006

Nonuniform fast fourier transforms using min-max interpolation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.ULTRAMIC.2008.03.006

Fast Fourier Transforms for Nonequispaced Data

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.ULTRAMIC.2008.03.006

Algorithm 778: L-BFGS-B: Fortran subroutines for large-scale bound-constrained optimization

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.ULTRAMIC.2008.03.006

The Transform Class in SPARX and EMAN2

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.ULTRAMIC.2008.03.006

Distributing many points on a sphere

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.ULTRAMIC.2008.03.006

10.1016/J.ULTRAMIC.2008.03.006

7 January 2021

Identifiers

DOI

1 reference

17 November 2017

1 reference

17 November 2017

1 reference

PMCID

2585382