(Q30884891)

27 June 2017

Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells (English)

1 reference

single cell transcriptomics

27 June 2017

1 reference

1 reference

A curated database reveals trends in single-cell transcriptomics

https://www.nxn.se/single-cell-studies/data.tsv

7 February 2021

1 reference

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25599176%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Florian Buettner

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25599176%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Kedar N Natarajan

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25599176%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Valentina Proserpio

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25599176%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Antonio Scialdone

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25599176%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Fabian J. Theis

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25599176%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

John Marioni

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25599176%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Oliver Stegle

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25599176%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

author name string

F Paolo Casale

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25599176%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

publication date

19 January 2015

1 reference

external data available at URL

27 June 2017

https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-2805

1 reference

A curated database reveals trends in single-cell transcriptomics

https://www.nxn.se/single-cell-studies/data.tsv

11 February 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25599176%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

volume

33

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25599176%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

page(s)

155-160

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25599176%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

issue

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25599176%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

31 May 2020

cell culture

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

https://www.nxn.se/single-cell-studies/data.tsv

cites work

Quantifying E. coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single Cells

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Imaging individual mRNA molecules using multiple singly labeled probes

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Solving the "world-to-chip" interface problem with a microfluidic matrix

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Comprehensive qPCR profiling of gene expression in single neuronal cells

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Microfluidic single-cell mRNA isolation and analysis

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Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst

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Single-cell profiling of epigenetic modifiers identifies PRDM14 as an inducer of cell fate in the mammalian embryo

21 January 2018

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Gene expression profiles of laser-captured adjacent neuronal subtypes

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Single-cell transcript analysis of pancreas development.

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RNA-Seq analysis to capture the transcriptome landscape of a single cell

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Characterization of the single-cell transcriptional landscape by highly multiplex RNA-seq

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Single-cell RNA-Seq profiling of human preimplantation embryos and embryonic stem cells

21 January 2018

1 reference

Tracing the derivation of embryonic stem cells from the inner cell mass by single-cell RNA-Seq analysis

21 January 2018

1 reference

Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells

21 January 2018

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The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells

21 January 2018

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Low-coverage single-cell mRNA sequencing reveals cellular heterogeneity and activated signaling pathways in developing cerebral cortex

21 January 2018

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Capturing heterogeneity in gene expression studies by surrogate variable analysis

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A Bayesian framework to account for complex non-genetic factors in gene expression levels greatly increases power in eQTL studies

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Detecting and correcting systematic variation in large-scale RNA sequencing data

21 January 2018

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Genetic programs in human and mouse early embryos revealed by single-cell RNA sequencing

21 January 2018

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Single-cell RNA sequencing reveals T helper cells synthesizing steroids de novo to contribute to immune homeostasis

21 January 2018

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Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise

21 January 2018

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Real-time gene expression: statistical challenges in design and inference.

21 January 2018

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Cell-cycle control of developmentally regulated transcription factors accounts for heterogeneity in human pluripotent cells

21 January 2018

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FaST linear mixed models for genome-wide association studies

21 January 2018

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Joint modelling of confounding factors and prominent genetic regulators provides increased accuracy in genetical genomics studies

21 January 2018

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Quartz-Seq: a highly reproducible and sensitive single-cell RNA sequencing method, reveals non-genetic gene-expression heterogeneity

21 January 2018

1 reference

Validation of noise models for single-cell transcriptomics

21 January 2018

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Fuel feeds function: energy metabolism and the T-cell response

21 January 2018

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The IL-4 receptor: signaling mechanisms and biologic functions

21 January 2018

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GATA-3 promotes Th2 responses through three different mechanisms: induction of Th2 cytokine production, selective growth of Th2 cells and inhibition of Th1 cell-specific factors

21 January 2018

1 reference

The transcription factor STAT3 is required for T helper 2 cell development

21 January 2018

1 reference

Kruppel-like transcription factor 13 regulates T lymphocyte survival in vivo

21 January 2018

1 reference

Batf coordinates multiple aspects of B and T cell function required for normal antibody responses

21 January 2018

1 reference

Stat6 and c-Jun mediate Th2 cell-specific IL-24 gene expression.

21 January 2018

1 reference

STRING 8--a global view on proteins and their functional interactions in 630 organisms

21 January 2018

1 reference

Posttranscriptional control of T cell effector function by aerobic glycolysis

21 January 2018

1 reference

Helper T cell differentiation is controlled by the cell cycle

21 January 2018

1 reference

Epigenetic regulation of T cell fate and function

21 January 2018

1 reference

Differential expression analysis for sequence count data

21 January 2018

1 reference

Using control genes to correct for unwanted variation in microarray data

21 January 2018

1 reference

Genome-wide efficient mixed-model analysis for association studies

21 January 2018

1 reference

A novel approach for resolving differences in single-cell gene expression patterns from zygote to blastocyst

21 January 2018

1 reference

Computational and analytical challenges in single-cell transcriptomics

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25599176

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Translational control: a general mechanism for gene regulation during T cell activation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25599176

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Single-cell gene expression profiling

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25599176