(Q30912369)

English

A dominant mutation in mediator of paramutation2, one of three second-largest subunits of a plant-specific RNA polymerase, disrupts multiple siRNA silencing processes

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12 February 2020

A dominant mutation in mediator of paramutation2, one of three second-largest subunits of a plant-specific RNA polymerase, disrupts multiple siRNA silencing processes (English)

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12 February 2020

Mario Arteaga-Vazquez

4

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12 February 2020

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Lyudmila Sidorenko

1

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12 February 2020

Jane E Dorweiler

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12 February 2020

A Mark Cigan

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12 February 2020

Meenal Vyas

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12 February 2020

Jerry Kermicle

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12 February 2020

Diane Jurcin

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12 February 2020

Jan Brzeski

8

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12 February 2020

Yu Cai

9

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12 February 2020

Vicki L Chandler

10

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12 February 2020

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20 November 2009

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12 February 2020

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12 February 2020

5

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12 February 2020

11

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12 February 2020

e1000725

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12 February 2020

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Creative Commons Attribution 4.0 International

20 November 2009

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April 2022 Public Data File from Crossref

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0 references

An effector of RNA-directed DNA methylation in arabidopsis is an ARGONAUTE 4- and RNA-binding protein.

1 reference

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21 June 2018

RNA-directed DNA methylation and demethylation in plants.

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21 June 2018

RNA polymerase V transcription guides ARGONAUTE4 to chromatin

1 reference

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21 June 2018

RNA-mediated chromatin-based silencing in plants

1 reference

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21 June 2018

Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes

1 reference

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21 June 2018

RNA-dependent RNA polymerase is required for enhancer-mediated transcriptional silencing associated with paramutation at the maize p1 gene

1 reference

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21 June 2018

Distinct size distribution of endogeneous siRNAs in maize: Evidence from deep sequencing in the mop1-1 mutant

1 reference

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21 June 2018

A paramutation phenomenon is involved in the genetics of maize low phytic acid1-241 (lpa1-241) trait

1 reference

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21 June 2018

Roles of RNA polymerase IV in gene silencing

1 reference

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21 June 2018

Paramutation: epigenetic instructions passed across generations

1 reference

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21 June 2018

A structural-maintenance-of-chromosomes hinge domain-containing protein is required for RNA-directed DNA methylation.

1 reference

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21 June 2018

PolIVb influences RNA-directed DNA methylation independently of its role in siRNA biogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

A novel class of bacteria-induced small RNAs in Arabidopsis.

1 reference

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21 June 2018

A novel Snf2 protein maintains trans-generational regulatory states established by paramutation in maize

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Physical and genetic structure of the maize genome reflects its complex evolutionary history

1 reference

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21 June 2018

Epigenetic inheritance in plants.

1 reference

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21 June 2018

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

1 reference

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21 June 2018

RNA-directed DNA methylation mediated by DRD1 and Pol IVb: a versatile pathway for transcriptional gene silencing in plants

1 reference

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21 June 2018

A role for Piwi and piRNAs in germ cell maintenance and transposon silencing in Zebrafish.

1 reference

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21 June 2018

Small RNA-mediated chromatin silencing directed to the 3' region of the Arabidopsis gene encoding the developmental regulator, FLC.

1 reference

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21 June 2018

Paramutation: from maize to mice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Somatic and meiotic instability of R-stippled, an aleurone spotting factor in maize

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

The properties, origin, and mechanism of conversion-type inheritance at the B locus in maize

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Continuous Variation in Level of Paramutation at the R Locus in Maize

1 reference

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21 June 2018

Paramutagenic Action of Paramutant R and R Alleles in Maize.

1 reference

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21 June 2018

Stippled Aleurone in Maize

1 reference

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21 June 2018

A Genetic Change Associated with the R Locus in Maize Which Is Directed and Potentially Reversible

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Initiation, establishment, and maintenance of heritable MuDR transposon silencing in maize are mediated by distinct factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

An RNA-dependent RNA polymerase is required for paramutation in maize

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

A novel class of small RNAs bind to MILI protein in mouse testes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Transcriptionally silenced transgenes in maize are activated by three mutations defective in paramutation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

A REGULAR AND CONTINUING CONVERSION-TYPE PHENOMENON AT THE B LOCUS IN MAIZE.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Two classes of endogenous small RNAs in Tetrahymena thermophila

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

The mop1 (mediator of paramutation1) mutant progressively reactivates one of the two genes encoded by the MuDR transposon in maize

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Pathways through the small RNA world of plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Reinforcement of silencing at transposons and highly repeated sequences requires the concerted action of two distinct RNA polymerases IV in Arabidopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Poetry of b1 paramutation: cis- and trans-chromatin communication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Rmr6 maintains meiotic inheritance of paramutant states in Zea mays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Paramutation: an encounter leaving a lasting impression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

RNA polymerase IV directs silencing of endogenous DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Sensitive and specific detection of microRNAs by northern blot analysis using LNA-modified oligonucleotide probes

1 reference

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21 June 2018

MUSCLE: a multiple sequence alignment method with reduced time and space complexity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Involvement of putative SNF2 chromatin remodeling protein DRD1 in RNA-directed DNA methylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Genetic and functional diversification of small RNA pathways in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Multiple sequence alignment with the Clustal series of programs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

The regulatory regions required for B' paramutation and expression are located far upstream of the maize b1 transcribed sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Differential chromatin structure within a tandem array 100 kb upstream of the maize b1 locus is associated with paramutation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

A mutation that prevents paramutation in maize also reverses Mutator transposon methylation and silencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Structural features and methylation patterns associated with paramutation at the r1 locus of Zea mays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Double-stranded RNA-mediated silencing of genomic tandem repeats and transposable elements in the D. melanogaster germline

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Transgene-induced silencing identifies sequences involved in the establishment of paramutation of the maize p1 gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Genetic factors required to maintain repression of a paramutagenic maize pl1 allele

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Transcriptional silencing and promoter methylation triggered by double-stranded RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

RNA-directed DNA methylation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Paramutation in maize

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Paramutation alters regulatory control of the maize pl locus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

A species of small antisense RNA in posttranscriptional gene silencing in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Allelic interactions heritably alter the activity of a metastable maize pl allele.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Organization of paramutagenicity in R-stippled maize

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Somatic variegation and germinal mutability reflect the position of transposable element Dissociation within the maize R gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Variegated phenotype and developmental methylation changes of a maize allele originating from epimutation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Paramutation, an allelic interaction, is associated with a stable and heritable reduction of transcription of the maize b regulatory gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Alternatively spliced products of the maize P gene encode proteins with homology to the DNA-binding domain of myb-like transcription factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

Meiotic instability of the R-r complex arising from displaced intragenic exchange and intrachromosomal rearrangement

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

21 June 2018

mediator of paramutation1 is required for establishment and maintenance of paramutation at multiple maize loci.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000725

21 January 2018

RNA polymerase IV functions in paramutation in Zea mays.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000725

21 January 2018

Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000725

21 January 2018

Atypical RNA polymerase subunits required for RNA-directed DNA methylation.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000725

21 January 2018

Role of the arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000725

21 January 2018

Arabidopsis histone deacetylase HDA6 is required for maintenance of transcriptional gene silencing and determines nuclear organization of rDNA repeats.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000725

21 January 2018

Transcriptional gene silencing as a tool for uncovering gene function in maize.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000725

21 January 2018

Selection and orientation of adjacent genes influences DAM-mediated male sterility in transformed maize.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000725

21 January 2018

An SNF2 protein associated with nuclear RNA silencing and the spread of a silencing signal between cells in Arabidopsis

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000725

21 January 2018

Characterization of a Multigene Family Encoding an Exopolygalacturonase in Maize

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000725

21 January 2018

Tissue-specific DNase I-sensitive sites of the maize P gene and their changes upon epimutation

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000725

21 January 2018

Molecular characterization of one of the maize polygalacturonase gene family members which are expressed during late pollen development.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2774164

25 November 2018

The Arabidopsis chromatin-modifying nuclear siRNA pathway involves a nucleolar RNA processing center

1 reference

https://pubmed.ncbi.nlm.nih.gov/19936058

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intragenic suppression of trans-dominant lethal substitutions in the conserved GEME motif of the beta subunit of RNA polymerase: evidence for functional cooperativity within the C-terminus

1 reference

https://pubmed.ncbi.nlm.nih.gov/19936058

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Trans-dominant mutations in the 3'-terminal region of the rpoB gene define highly conserved, essential residues in the beta subunit of RNA polymerase: the GEME motif

1 reference

https://pubmed.ncbi.nlm.nih.gov/19936058

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PGEN.1000725

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19936058%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19936058%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19936058%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

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