(Q30927130)

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A coherent approach for analysis of the Illumina HumanMethylation450 BeadChip improves data quality and performance in epigenome-wide association studies

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scholarly article

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Europe PubMed Central

PMC publication ID

15 November 2017

A coherent approach for analysis of the Illumina HumanMethylation450 BeadChip improves data quality and performance in epigenome-wide association studies (English)

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Europe PubMed Central

PMC publication ID

15 November 2017

genome-wide association study

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corrigendum / erratum

Erratum to: A coherent approach for analysis of the Illumina HumanMethylation450 BeadChip improves data quality and performance in epigenome-wide association studies.

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Marjo-Riitta Järvelin

9

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25853392%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25853392%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

10

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25853392%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

11

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Europe PubMed Central

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8 June 2020

12

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Jaspal S Kooner

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8 June 2020

8

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James Scott

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8 June 2020

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Alexander W Drong

2

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8 June 2020

Marie Loh

3

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25853392%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Weihua Zhang

4

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25853392%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

William R Scott

5

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Europe PubMed Central

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8 June 2020

Sian-Tsung Tan

6

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Europe PubMed Central

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8 June 2020

Uzma Afzal

7

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Europe PubMed Central

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8 June 2020

John C Chambers

13

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8 June 2020

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15 February 2015

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Europe PubMed Central

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15 November 2017

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25853392%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

16

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Europe PubMed Central

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8 June 2020

37

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Europe PubMed Central

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8 June 2020

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Creative Commons Attribution 4.0 International

15 February 2015

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April 2022 Public Data File from Crossref

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limma

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Europe PubMed Central

22 June 2022

https://europepmc.org/article/PMC/4365767

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CZ Software Mentions: A large dataset of software mentions in the biomedical literature

object named as

minfi

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

Functional normalization of 450k methylation array data improves replication in large cancer studies.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

Reference-free cell mixture adjustments in analysis of DNA methylation data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

ChAMP: 450k Chip Analysis Methylation Pipeline

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

A systematic assessment of normalization approaches for the Infinium 450K methylation platform

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

Methylomics of gene expression in human monocytes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

A data-driven approach to preprocessing Illumina 450K methylation array data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

Identification of CpG-SNPs associated with type 2 diabetes and differential DNA methylation in human pancreatic islets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

Additional annotation enhances potential for biologically-relevant analysis of the Illumina Infinium HumanMethylation450 BeadChip array

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

Discovery of cross-reactive probes and polymorphic CpGs in the Illumina Infinium HumanMethylation450 microarray

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

Epigenetic changes in patients with multiple sclerosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

SWAN: Subset-quantile within array normalization for illumina infinium HumanMethylation450 BeadChips

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

Complete pipeline for Infinium(®) Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

DNA methylation arrays as surrogate measures of cell mixture distribution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

Bump hunting to identify differentially methylated regions in epigenetic epidemiology studies.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

DNA methylation profiling identifies epigenetic dysregulation in pancreatic islets from type 2 diabetic patients

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

IMA: an R package for high-throughput analysis of Illumina's 450K Infinium methylation data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

Genome-wide survey reveals predisposing diabetes type 2-related DNA methylation variations in human peripheral blood

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

lumi: a pipeline for processing Illumina microarray

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

Epigenetic events in mammalian germ-cell development: reprogramming and beyond

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

Xist and the order of silencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

DNA methylation profiling of human chromosomes 6, 20 and 22

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

Adjusting batch effects in microarray expression data using empirical Bayes methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4365767

21 June 2018

DNA Methylation and Cancer

1 reference

https://api.crossref.org/works/10.1186%2FS13059-015-0600-X

21 January 2018

DNA methylation analysis of BDNF gene promoters in peripheral blood cells of schizophrenia patients

1 reference

https://api.crossref.org/works/10.1186%2FS13059-015-0600-X

21 January 2018

High density DNA methylation array with single CpG site resolution

1 reference

https://api.crossref.org/works/10.1186%2FS13059-015-0600-X

21 January 2018

Epigenome-wide association studies without the need for cell-type composition

1 reference

https://api.crossref.org/works/10.1186%2FS13059-015-0600-X

21 January 2018

Evaluation of the Infinium Methylation 450K technology

1 reference

https://pubmed.ncbi.nlm.nih.gov/25853392

12 December 2020

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10.1186/S13059-015-0600-X

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25853392%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25853392%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25853392%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

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